Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeg_1825 |
Symbol | |
ID | 8491829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ammonifex degensii KC4 |
Kingdom | Bacteria |
Replicon accession | NC_013385 |
Strand | - |
Start bp | 1821104 |
End bp | 1823149 |
Gene Length | 2046 bp |
Protein Length | 681 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 646359818 |
Product | excinuclease ABC, B subunit |
Protein accession | YP_003239761 |
Protein GI | 260893664 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0508947 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGCTTT TTAAGCTTAG GGCCGACTTT GCTCCGGCAG GGGATCAGCC CCAGGCCATC GCCAAGCTGG TGGAAGGGGT CAGAAAAGGT TACCGTATGC AGACCCTGCT GGGAGTTACC GGTTCGGGCA AAACTTTTAC TATGGCCAAC GTCATCGCCC AGCTCAACCG GCCTACCCTG GTGATAGCTC CCAACAAGAC CCTGGCGGCC CAGCTCTGCA GCGAGTTCAA AGAATTCTTC CCGGAAAATG CGGTGGAGTA TTTCATAAGC TACTACGACT ACTATCAGCC GGAGGCCTAC CTGCCGCAGG CCGATCTCTA CATAGAGAAA GACGCCCTCA TCAACGAAGA GATAGACAAG CTCCGGCACG CGGCCACGGC AGCGGTTCTG GAGCGTCGCG ACGTCATCGT AGTGGCCAGC GTGTCCTGCA TCTACAGCCT GGGTAATCCG GTAGATTACC GCGATCAGGT AGTTTCCCTG CGGCGAGGAG AGTGCTACGA CCGCGATAGC ATACTGCGGA AGCTCGTCCG CATCCGCTAC GAGCGCACCG AAGGGGATTT CACCCGGGGT AAGTTCAGGG TGCGGGGGGA TGTGCTCGAC GTTTTCCCCG CCTCCACTTC CGAAAGGGCC ATCCGGGTGG AGTTCTTCGG GGACGAGGTA GAGCGCATCC TGGAATTTGA CCCGCTGACC GGCGACATCC TAGGGGAGAG GTACCACGTT TCTTTCTTCC CGGCCACCCA CTATGTCACC GCCCCGGAGC GTCTGGAAAA TATCATTGCG GCCATCGAGG AGGAACTGGC CGAGCGGGTA GCTTGGTTCA AAGCTCAGGG GCGCCTTCTG GAGGCCCAGC GGCTGGAGAC CAGGACGCGC TACGATCTGG AAATGCTGCG GGAGGTAGGC TACTGTAAGG GCATCGAAAA CTACTCTCGC TACTTGACGG GCAGGGCGCC GGGCGAGCCC CCTTACACCC TGCTCGACTA CTTCCCTCCA GACTTCCTGG TCTTCATCGA CGAGTCGCAC GTGACCGTGC CACAGCTGCA CGGGATGTAC GAGGGGGACC GTTCCCGCAA GGAGTCCCTG GTAGAGTACG GTTTCCGGCT CCCCTCGGCC TTCGACAACC GCCCCCTCAA GTTCGAGGAG TTTATCGAGC GGGTAAACCA GGTGATCTTC GTCTCCGCCA CCCCCGGTCC TTATGAACTG GAGCACAGTG AGCAGATAGT GGAGCAGATC GTGCGTCCCA CCGGCCTGGT GGATCCCCCC ATGGTGGTGC GGCCGACCAA GGGGCAGATA GACGACTTAC TGGGGGAGAT AAGGACGCGG GTGGCACGAG GGGAGAGGGT GCTGGTGACC ACCCTGACCA AGCGGATGGC GGAGGACCTG GCCGATTACC TACGGGAGAT GGGGGTGAAA GTGCGGTACC TCCACGCCGA TATCGACGCT TTAGAGCGCA TGGCCATTAT CCGGGATCTG CGCCTGGGGG TTTTTGACGT CCTGGTGGGA ATAAACCTGC TCCGCGAGGG GCTGGACCTG CCCGAGGTCA GCTTGGTGGC CATCTTGGAC GCCGATAAAG AGGGCTACCT GCGTTCGGAG CGCTCGCTTA TCCAGATAGC GGGGCGGGCG GCTCGCAACG TCAACGGCCT GGTGATCCTT TACGCCGACC GGATCACCGA GTCGATGCGC CGGGCCATAG AGGAAACGGA GCGCCGCCGG CGCCTGCAAA TAGAATACAA CCAGAAGCAC GGTATCGTCC CCCGCACGGT AGAGAAACCG GTGCGGGAAG TCATCGAGGC TACCAAGGTG GCGGAGGAGA AGGGCGTTTA CGAAGTCCGA CCCAAGGAGC TCCCCACCTC CAAGCTCAAA TCCCTAGCGG CGGCCTACGA GCGACAGATG CGCGAGGCGG CTAAGAGCCT GGATTTCGAG TTGGCCGCGC AGCTGCGCGA CATCTGGCTG GAGCTCAGGG CGGAGCTCGT GGCGCGGGGA GTGGAGGTGC GCGGAGGAAG GGGTAGAAGT AAAAAGAGGT GTGCGGCATG CAAGACGCCA TTATAG
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Protein sequence | MGLFKLRADF APAGDQPQAI AKLVEGVRKG YRMQTLLGVT GSGKTFTMAN VIAQLNRPTL VIAPNKTLAA QLCSEFKEFF PENAVEYFIS YYDYYQPEAY LPQADLYIEK DALINEEIDK LRHAATAAVL ERRDVIVVAS VSCIYSLGNP VDYRDQVVSL RRGECYDRDS ILRKLVRIRY ERTEGDFTRG KFRVRGDVLD VFPASTSERA IRVEFFGDEV ERILEFDPLT GDILGERYHV SFFPATHYVT APERLENIIA AIEEELAERV AWFKAQGRLL EAQRLETRTR YDLEMLREVG YCKGIENYSR YLTGRAPGEP PYTLLDYFPP DFLVFIDESH VTVPQLHGMY EGDRSRKESL VEYGFRLPSA FDNRPLKFEE FIERVNQVIF VSATPGPYEL EHSEQIVEQI VRPTGLVDPP MVVRPTKGQI DDLLGEIRTR VARGERVLVT TLTKRMAEDL ADYLREMGVK VRYLHADIDA LERMAIIRDL RLGVFDVLVG INLLREGLDL PEVSLVAILD ADKEGYLRSE RSLIQIAGRA ARNVNGLVIL YADRITESMR RAIEETERRR RLQIEYNQKH GIVPRTVEKP VREVIEATKV AEEKGVYEVR PKELPTSKLK SLAAAYERQM REAAKSLDFE LAAQLRDIWL ELRAELVARG VEVRGGRGRS KKRCAACKTP L
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