| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1814 |
|---|
| Symbol | |
|---|
| ID | 8491818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 1808447 |
|---|
| End bp | 1809250 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 646359808 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_003239751 |
|---|
| Protein GI | 260893654 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCTGCAC CGAGCTTTTA CGACACCTAC AAAAATTACC TGGAGCGTTA CGTTTGCGAA
GGTGGAACGG AAGGGGTCCT TCTAGAAGCT TACAGCGACT TAACCAGCCA ACTAGATGAT
TACCAGATCC AGACAGCAAA CATCCTGGAT GTGCATACCA GAGCCCTGCG TGAAATAATG
GGCATCCGCC GCGACAGCGA CAGCGTTCAG TGGATCTATA TTGAGCGCGC GACAGAATTC
CTGACGCAAA TCCTGGTAGT CATAGATGCC TTCTTGCTCC AGCTCAAAGA TCGCGTCGAG
CGCGATCCTC TGACCGGGCT TTATAACCGC CTGGCTCTCT ATCCCATTTT AAGCCAGATG
TTAAAGAAAT CCCAGGAAGA GGAAAGCCCT TTAGTAGTAG CCATGCTGGA TCTGGACAAC
TTCAAGACCG TTAACGACGA GTACGGGCAC CACGCCGGCG ACGAGGTCCT GCGCGCAGCA
GCCGGGATAA TAAAGAAGAA CCTACGCAGC GGTGACAAAG TCTTTCGCTA CGGAGGAGAA
GAGTTCCTAA TCGTCCTGCC CAATACGAGC CTTGACAAGG CAGTGGTAGC CCTAGAAAGG
ATTCGCGGCC AGATAGCTGC CAACCTCTTT ATCCCGGGAA CAGAAACCTC CATCACCGCC
AGTATCGGGG CAGCGGGATA CACCGGAAAG GGATCTGTTT CCCCAGATGA CCTCATCTTG
CAGGCCGACA AAGCCCTCTA CAGGGCTAAG AGGGAAGGCA AAAACAAGGT AGTCTTGCAG
GAAGAACCGC AAGCCAAGCA TTGA
|
|---|
| Protein sequence | MAAPSFYDTY KNYLERYVCE GGTEGVLLEA YSDLTSQLDD YQIQTANILD VHTRALREIM
GIRRDSDSVQ WIYIERATEF LTQILVVIDA FLLQLKDRVE RDPLTGLYNR LALYPILSQM
LKKSQEEESP LVVAMLDLDN FKTVNDEYGH HAGDEVLRAA AGIIKKNLRS GDKVFRYGGE
EFLIVLPNTS LDKAVVALER IRGQIAANLF IPGTETSITA SIGAAGYTGK GSVSPDDLIL
QADKALYRAK REGKNKVVLQ EEPQAKH
|
|---|
| |