| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1795 |
|---|
| Symbol | |
|---|
| ID | 8491798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 1791610 |
|---|
| End bp | 1792185 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 646359789 |
|---|
| Product | putative multidrug resistance protein |
|---|
| Protein accession | YP_003239733 |
|---|
| Protein GI | 260893636 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.1618 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTACGCA AACACCTTTA CTTGTTCTCC CTGGCCGTAC TGCCGGTAAT GATCTGTTCA
GGCATGGTCT ACTCCGTACT GGCCCTTTAC TTCTCCCACC TAGGAGCCTC TACCGGTGAG
ATTGGGCTCA TTTACACCAC TGGAGCTGCC GCCGGCGCTC TGGCCGGGCC GCACCTAGGA
CGACTGGCCG ATCGGTACGG TCGCAAACCG GTCATCCTGG GAGCCATGCT CGGTTTCTTA
GCCATCTTCC TGGGCTACGC CTCCATGAAA CAGGTCGAAG TAGCTTTCTT CATCCAGGCG
GTGGAGGGCG CCGCCTGGGC CGCCTTGGGA ACCGCCGCCT CGGCCATGGT AGCCGACCTC
GCCCCGCCGG CAGAGCGCGG CTGGGCCATG GGGGTGTACG ACCGCACCTG GTTCATCGGT
TGGGTAATCG GCCCCACCTT TGGCGGTTTC ATTGCGGAGC ACTTAGGTTT CCGGTGCACC
TTCCTGGTAG CCGGTAGCCT CCTGCTTTTA GGGATCGGCC TGCTTTCCCT GGTTCCCGAG
CCCCGCCGCT CTTCCGAACC TACCGGCGAA TCGTAA
|
|---|
| Protein sequence | MLRKHLYLFS LAVLPVMICS GMVYSVLALY FSHLGASTGE IGLIYTTGAA AGALAGPHLG
RLADRYGRKP VILGAMLGFL AIFLGYASMK QVEVAFFIQA VEGAAWAALG TAASAMVADL
APPAERGWAM GVYDRTWFIG WVIGPTFGGF IAEHLGFRCT FLVAGSLLLL GIGLLSLVPE
PRRSSEPTGE S
|
|---|
| |