Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeg_1793 |
Symbol | |
ID | 8491796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ammonifex degensii KC4 |
Kingdom | Bacteria |
Replicon accession | NC_013385 |
Strand | - |
Start bp | 1789638 |
End bp | 1790462 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 646359787 |
Product | beta-lactamase domain protein |
Protein accession | YP_003239731 |
Protein GI | 260893634 |
COG category | [R] General function prediction only |
COG ID | [COG1237] Metal-dependent hydrolases of the beta-lactamase superfamily II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000988324 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGGGTGA CGGTGCTGGT GGAAAACAGT GTGGGCAAAC CTCTGGGGCT TACCGGAGAG CATGGGCTCG GCCTGTGGGT GGAGTATGAG GGGCATAAGA TCCTTTTCGA TGCCGGCCAA CGCGGGGCGG TAGTGTCCAA CGCCCACCTC TTGGGCATAG ATTTGCGGGG AGCGGAGGCC ATCGTTTTAA GTCACGGTCA CTACGACCAC ACGGGGGGCT TGAGGGCGGT GCTGGAGTAC ATCGGTAGGC GCATCCCCGT CTACGCCCAT CCGGACGTCT TCAGCCCCCA CCGCGTTTCC TCCCCCGTCG ATCGCTACGT GGGCATTCCC TACTGTCGCG AAGAGCTGGA GGCTTTGGGG GCCGAGTTTC GCTGGGTAAA GGAGCCTTTG GAGCTCTTCC CTGGCTTATG GCTCAGCGGC GAGGTTCCCC GCCGGACGGA GTTCGAGCAG GGGGACGAGC GGATGTACGT GCTGGTGGAG GGGAAGAAGG TTCCCGACCC CTTGGCAGAC GATCTTAGCC TTTACCTCAA GACCTCTTCG GGCTTGGCTA TACTGCTGGG TTGTGCCCAT GCCGGGGTGA TCAATATCGT CCAGCATGCC CAGGAAGTTA CCGGGGAAAA GAGGGTGGCG GCCATCATCG GTGGCACCCA CCTCGGTCCC GTTTCGGAGG AGCAGCTGGA GGAGACCATC GTGCGCCTGA CCCGGATGGA TCTCGACCTT CTGGCGGCCA ACCACTGCAC GGGCTTGGCC GTAGCGGCGC GGCTCAGAGG GATATTCGGA GCCCGCTTTA GCTTTGCCGC CACCGGCGAG GTGCTGGAGC TCTAA
|
Protein sequence | MRVTVLVENS VGKPLGLTGE HGLGLWVEYE GHKILFDAGQ RGAVVSNAHL LGIDLRGAEA IVLSHGHYDH TGGLRAVLEY IGRRIPVYAH PDVFSPHRVS SPVDRYVGIP YCREELEALG AEFRWVKEPL ELFPGLWLSG EVPRRTEFEQ GDERMYVLVE GKKVPDPLAD DLSLYLKTSS GLAILLGCAH AGVINIVQHA QEVTGEKRVA AIIGGTHLGP VSEEQLEETI VRLTRMDLDL LAANHCTGLA VAARLRGIFG ARFSFAATGE VLEL
|
| |