| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1738 |
|---|
| Symbol | |
|---|
| ID | 8491741 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1731983 |
|---|
| End bp | 1733491 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 646359735 |
|---|
| Product | transposase, IS605 OrfB family |
|---|
| Protein accession | YP_003239679 |
|---|
| Protein GI | 260893582 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000991726 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGGGCTGC TGGCCACGTA CCAGACGCGG ATTGACGATA AAGGCTGCTA CCCCTTCCTC
GAAGCTTGTG GCGAATACTT CGGCCGCCTG GAAAGAAAGC TCTACGTGGA CTACCACATC
AAAGGTCTGC AGGTGAAGGA ACTGAAGCGC AAGTACATCG CGGAACACGG CATCACGGCC
CGGCAGTTCA ACTCCCTCTT AAAGGACCTG ACCGCGAAAC TCGCGTCTGT CCGCGAGAGC
CTCATCTTCC GTAAACGGGA TCTCCTGGGC CGTATCGGGC GACTTGAGCG GTTCATCGAG
GAGAAGGAGA GGGAGCGGGA GAGGCTTAAG AGGTCCCTGT CCAGGCTGAC ACCCCGCTCG
GAAGAGTGGC AGAAGAAGGT CGATCGCCTG AAGAAGGTAA AGTTCGTCCT TCACCAGAAG
AAGCGGCGTT TGAGGAACCT GAGGCACAAG CTGGAGGCGG TGCGGAGGGA CCTGGAGTCG
GGCCGGTACC CCATCTGTTT CGGCGGCCGG AAGCTCTTCA AGGCCCAGCA CAATCTGGAG
GCAAACGGCT TCCGGGACCA CGCGGAGTGG TTGCGCGCCT GGCGTGAAGC GCGTTCGGGC
AACTTCCTGG TGCTCGGCTC TAAAGACGAG GCGTGCGGCA ACCAGACCTG CACTTACACT
AAGGACAACA CGCTGCGGGT CAGGGTTCCG GACCGGCTGC GGGCCGGGTT TGGGCACTGG
GTCTTGATCA AGTCCGTCCG CTTCCCGTAC GGCCAGGAGC ACCTGGACCG GGTAAAACGA
CCGGTATGTG TTGTGAAGGG CCGGAAAGTC TACCGTGCGG TCACGTACCG CTTCGTGCGG
CGCAAAGGGG CCTGGTACCT TTTTGCCACG GTGGAGCGGG ACGACCCGGC ACCTTCGACG
AGCAGGCAAA ACGGCGCGGT GGGCATCGAC CTGAACGACG GCTTTTTACG GGTGGGTGAA
GTGGACCGGT CCGGCAACCC GGTAGACGAG TTCAAGGTCC CCGTAGCTAT GAGGGACAGG
ACGAGGGGGC AAATAGTTGC GGCCCTGGGT GAAGCGGTCA AAAAGGTCGT CCTGTACGCG
AAGGAAAAGG GAAAGCCGGT GGTCATAGAG GATCTGGACT TCACCGGGAA GAAGCAGGGC
TTGAGGGAGT CCAACTCCCA GTATGCCCGC ATGCTCTCGG GCTTTGCCTA CAGGAAGTTC
CGCGTGATGA CCGAGTCCTG CTGCTCGCGT GAGGGCGTGG AACTCTTGCG GGCCAACCCG
TTTGCGACGT CGCTTATAGG GCAGCTGAAG TTCATGGCCA GGTACGGTTT AAGCCCGCAT
GGTGCGGCGG CGTGTGTGAT AGCCCGGCGC GGCCTGGGCT TTGGCCTGGA GCGGGCACCG
GAAGTTTCAG CCCCGGGAAT CCCGCCGCGG GGGAGGGCCT CACGGCGGGG CTACTGGCGG
CGGGTGTGCG AGTCCCTCAA GCGCGGTTCC GGCCTCCGCG TGGACGTGCT CTACGCCGAC
AGGTTCTGA
|
|---|
| Protein sequence | MGLLATYQTR IDDKGCYPFL EACGEYFGRL ERKLYVDYHI KGLQVKELKR KYIAEHGITA
RQFNSLLKDL TAKLASVRES LIFRKRDLLG RIGRLERFIE EKERERERLK RSLSRLTPRS
EEWQKKVDRL KKVKFVLHQK KRRLRNLRHK LEAVRRDLES GRYPICFGGR KLFKAQHNLE
ANGFRDHAEW LRAWREARSG NFLVLGSKDE ACGNQTCTYT KDNTLRVRVP DRLRAGFGHW
VLIKSVRFPY GQEHLDRVKR PVCVVKGRKV YRAVTYRFVR RKGAWYLFAT VERDDPAPST
SRQNGAVGID LNDGFLRVGE VDRSGNPVDE FKVPVAMRDR TRGQIVAALG EAVKKVVLYA
KEKGKPVVIE DLDFTGKKQG LRESNSQYAR MLSGFAYRKF RVMTESCCSR EGVELLRANP
FATSLIGQLK FMARYGLSPH GAAACVIARR GLGFGLERAP EVSAPGIPPR GRASRRGYWR
RVCESLKRGS GLRVDVLYAD RF
|
|---|
| |