| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1725 |
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| Symbol | |
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| ID | 8491725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | - |
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| Start bp | 1715543 |
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| End bp | 1717204 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 646359720 |
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| Product | general secretory pathway protein E |
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| Protein accession | YP_003239667 |
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| Protein GI | 260893570 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E
[TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCGCAAA ACAGAAAAAA GCGCCTCGGC GAGAGGCTCG TAGAAGAGGG CCTCATAACG
CGGGAGCAGC TGGAGGAAGC TTTAAAGATC CAGGCCCGCA CGGGAGAACT CTTGGGCCAG
GTACTGGTGC GCATGGGCGC GATAAGCGAG GAAGACCTCA ACCGGGTGCT GGGAATAAGC
TCTTCTGCCA CCAAGGAGTT GCAGGTATCT CCTGAACTTT TAAAGCTTGT GCCCGAGGAC
CTGGCTCGCA GCCGCAAGGT TTTCCCCTTA AAGAAAGAAG GAAACCGGCT TTTTCTCCTC
ATGGCCAACC CGCTGGACAT CACCACCATC GACGACCTGA GGCTCTGGAC GGGCTTGGAA
ATCGAGCCGG TGAAGGCCGA GGAGAGGGAA ATAAGGGCGC TCATCAACCG CCACTACGGC
CTGCCTGAAG TGGAAAGGGC TCTGGAAGAG CTCGGGGTTT CGGCCGAAGA GACGGAGATA
GAGGAAGCTT TAGTGGACCG AGCTCCTATT GTGCAGTTGG TCAACTCCCT GATTTCCGGG
GCGGTGGACG AGCAGGCCAG CGACATTCAC GTGGAGCCTT TTGAAAACGA GGTGCGGGTG
CGTTACCGGG TGGACGGCAT TTTGCACGAG GTCATGCGCC TCCCGCGCCG TATGGCCCCG
GCCCTGGTAG CCCGCATCAA GATCATGGCT AATATGGACA TTGCCGAGCG CCGCCTTCCC
CAGGACGGCC GCATCCTCAC GCGAGTAGGC GGAAAGGAGC TGGATCTTCG GGTTTCCACC
TTTCCCACCA TCTTCGGGGA AAAGGTGGTA ATAAGGCTGC TCGATAAGGA GCAGCTGAAA
AGCTTTACCC TGGAAAACCT GGGCTTCTCA CCCCAGAACC TGGCCACTTT TAAAAACTTC
CTGCACAGCT CCTACGGTAT GGTCCTGCTC ACCGGCCCCA CCGGCTCGGG CAAGACCACT
ACCCTTTACG CGGCCCTGGC TTATCTCAAC AGCGTGGAGA AAAACATTGT CACCGTGGAA
GACCCGGTGG AGTATGTACT GGAGGGGATA AACCAGGCGC AGGTGAATGT CAAGGCAGGG
GCTACTTTTG CTACCTACCT CCGTTCCATC CTGCGGCAGG ATCCGGATAT CATTATGGTA
GGGGAGATCC GGGACCTGGA GACGGCGGAG ATCGCCGTGC AGGCGGCCAC CACCGGGCAC
CTGGTCCTCT CCACCTTACA CACCAACGAC GCTCCTGGGG CGCTTACCCG CCTTCTGGAC
ATGGGAGTGG AGCCTTTCAT GGTAGCCTCT TCGGTTCTGG GGGTGGTGGC GCAGCGCCTG
GTGCGCACCA TCTGTCCCCG CTGCCGCGAG CCTCACGAGC CTTCCGAACC GGAACTGGCC
TTCCTGGGCA AAGAAAGGCT CAACGGCCCT ATTTACCGGG GGCGCGGGTG CGATTACTGC
CGCCACACCG GCTACCGCGG GAGGGTGGCA GTGCACGAGG TGTTGCGGGT TTCTCCTCGC
CTCCAGCGCC TGGTCCTGAA CAAGGCTTCC ACCGAGGAAC TGCGCCGGGC GGCTTTGCAG
GAAGGGATGA TCTCGCTCAA GGAAGACGCG GTGAGCAAGG TTCTGCAGGG CATCACCTCT
GTAGCCGAGG TCATGCGGGT CCTTTACCAG GAAGGAGGCT AA
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| Protein sequence | MAQNRKKRLG ERLVEEGLIT REQLEEALKI QARTGELLGQ VLVRMGAISE EDLNRVLGIS
SSATKELQVS PELLKLVPED LARSRKVFPL KKEGNRLFLL MANPLDITTI DDLRLWTGLE
IEPVKAEERE IRALINRHYG LPEVERALEE LGVSAEETEI EEALVDRAPI VQLVNSLISG
AVDEQASDIH VEPFENEVRV RYRVDGILHE VMRLPRRMAP ALVARIKIMA NMDIAERRLP
QDGRILTRVG GKELDLRVST FPTIFGEKVV IRLLDKEQLK SFTLENLGFS PQNLATFKNF
LHSSYGMVLL TGPTGSGKTT TLYAALAYLN SVEKNIVTVE DPVEYVLEGI NQAQVNVKAG
ATFATYLRSI LRQDPDIIMV GEIRDLETAE IAVQAATTGH LVLSTLHTND APGALTRLLD
MGVEPFMVAS SVLGVVAQRL VRTICPRCRE PHEPSEPELA FLGKERLNGP IYRGRGCDYC
RHTGYRGRVA VHEVLRVSPR LQRLVLNKAS TEELRRAALQ EGMISLKEDA VSKVLQGITS
VAEVMRVLYQ EGG
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