| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1624 |
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| Symbol | |
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| ID | 8491620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | - |
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| Start bp | 1611122 |
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| End bp | 1613143 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 646359617 |
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| Product | diguanylate cyclase/phosphodiesterase with GAF sensor |
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| Protein accession | YP_003239568 |
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| Protein GI | 260893471 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGCAGC TGCCGGCAGG GAGAGTGGCG TTAGTTTATC TTCTGCTTGC TTCTTTGTGG
GTTTTCCTTT CGGATCGCTG GCTAGCTTTT TCCTTCCCTC CACCTTTCAA CTACCACCTC
AGTCTGGTTA AAGGGCTGGG TTTTGTGGGC TTGACCGCTC TCTTCCTGTA CCTAGGGCTG
AGGCGCTTCC GTTCCCTGCA GGCGCGGGCG GAGGAGAGGA TCGAGCATCT CAACCGTATG
TACGCCCTCT TGGCGGAAAC CAACCATGCC TTGATCCGCC TGCAAAGTCC CCAGCCGCTT
CTGGCGGCAA TTTGCCGGGC GGCGGTAGAA GAGGGCCTTT TCGCTACGGC CTGGGCCGTG
CTTAAGGGTC CCGGCGGTTC CTGGGAACTG GTGGCTCGGG AGGGAAAGGA GGTTCCCGCC
TTTGTGCCCA GCTTTTTAAC CCCGCCTTAC CAGGTGATTA ACGATCTGCT CTCCTACAAA
GGGGAATTTC CCTCCAAAGA CCTTTTCCTG GCCCAAGGGA TAAGAACAAT AGCCTTTCTA
CCTCTCACGG CCAACAAGGA TATCTCGGGC CTGTTGGCCT TCGGCGCGGA GAAGCCCGGA
GTTTTTGGCA AAGAAGAGCT AGAGCTTATG GCACAAATAG CGGCCGATAT TTCTTTTGGT
TTGGAGGTTT TGGCCCACCG GGAGCAGTGC CTGCAGGTAC AAGAGAAACT TCACCATTTG
GTGCACCATG ATCCTCTCAC CGGCCTGCCG CATCGCTTCT ACCTGGAAGA CCATCTGAAG
CAGGCGGTAT TGAAAGCGCG GCGGGGAATT TCTAGTGCCC TGCTGGTAAT AGACATAGAT
AACTTCCAAT TAGTCAACGA TAACTGGGGG TATAAGGCAG GAGACAGGCT TTTGCAAGCC
TTTGCCCGTT TTTTGCAGGA AAACATCCGG GAGGAAGACA TCATAGCCCG GGTGGCCGGC
GATAAGTTCA TGGTGCTAAT GGAAGACGTT TTTGAGGAGG AGGCTTGTAA GTTAGCGGAG
GAACTCCGCC GGCGGGTAGA GGAAGGTTCT TTTGAGCTGG ATGGGCAGCG TTGCCGCATA
ACGGTCAGCG CAGGTATCAG CATGGTCAAG GGGGACGAGG CGGCAGAAAC AGTAATGAGC
CAGGCCGACC TGGCTTTACG GCGGGCTAAG GAAGAGGGGC GCAACCGGGT GGTGCTCTTC
CGGCCGGAGG AAGAGCTGCT GGCCAGGCTT AAAGGAGAGC AGGAAGTGCT AAATTTGCTC
AAAGAGGCCC TGGCCACCGG CCGGGGGCTG TTGCTCTTCT TGCAGCCAGT GGTGAGACTT
TCGGACCTAC AGGTGGTCCA TTATGAGGCT TTGCTACGGC TGCGCGAGTG CAATATGGAC
AGGTATTGTT CTCCGGCGCA GTTTATTCCC CTGGCGGAGC GCTTCGGCCT CATGCCCCGT
CTTGACCGCT GGGTGATAGA AGCGGCTTTA GATATTCTGA GAGCTCATCC AAAGCTTAAG
CTTTTCGTAA ACCTCTCGGG CCTGAGCGTG GGGGACGATT CCCTTCTTGA GTACCTGCAG
GCGAAACTCA AGGAAAAAGA GGTGGACCCC TCGCGCCTGG GATTTGAGGT GACTGAGACG
GCAGCCATAA GGAATCTCTT GCGGGCGGAG AGGTGGCTCG GCAGGCTAAA GCAGCTAGGA
TGCGAGTTGG CTTTGGACGA CTTCGGCAGC GGTTTTTCCA CCTTCAGCTA CCTGCGTAGT
TTGCCGGTGA ATTACTTGAA GATAGACCTC TCTTTCATCC GCGGGCTTAC TTCCGACCGG
ATGCACCGAG CACTGGTGGA GGCCATGAAC ACGGTGGCCC ACACTTTAGG TAAACTCACC
GTAGCAGAGG GAATAGAGAA CGAAGAAACG CTGAGGATAC TCCAGGAACT GGGGACCGAT
TTCGGCCAAG GGTACTATTT CGGCCGTCCG GAGCCGGTAG AGGCGATCAT TGCCCGGCAA
CCTGAACTCG CAGGCGGGCC AGATCTTCCG GCCGCCCCCT AA
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| Protein sequence | MRQLPAGRVA LVYLLLASLW VFLSDRWLAF SFPPPFNYHL SLVKGLGFVG LTALFLYLGL
RRFRSLQARA EERIEHLNRM YALLAETNHA LIRLQSPQPL LAAICRAAVE EGLFATAWAV
LKGPGGSWEL VAREGKEVPA FVPSFLTPPY QVINDLLSYK GEFPSKDLFL AQGIRTIAFL
PLTANKDISG LLAFGAEKPG VFGKEELELM AQIAADISFG LEVLAHREQC LQVQEKLHHL
VHHDPLTGLP HRFYLEDHLK QAVLKARRGI SSALLVIDID NFQLVNDNWG YKAGDRLLQA
FARFLQENIR EEDIIARVAG DKFMVLMEDV FEEEACKLAE ELRRRVEEGS FELDGQRCRI
TVSAGISMVK GDEAAETVMS QADLALRRAK EEGRNRVVLF RPEEELLARL KGEQEVLNLL
KEALATGRGL LLFLQPVVRL SDLQVVHYEA LLRLRECNMD RYCSPAQFIP LAERFGLMPR
LDRWVIEAAL DILRAHPKLK LFVNLSGLSV GDDSLLEYLQ AKLKEKEVDP SRLGFEVTET
AAIRNLLRAE RWLGRLKQLG CELALDDFGS GFSTFSYLRS LPVNYLKIDL SFIRGLTSDR
MHRALVEAMN TVAHTLGKLT VAEGIENEET LRILQELGTD FGQGYYFGRP EPVEAIIARQ
PELAGGPDLP AAP
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