| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1618 |
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| Symbol | |
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| ID | 8491614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | - |
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| Start bp | 1604370 |
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| End bp | 1605731 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 646359611 |
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| Product | RNA polymerase, sigma 54 subunit, RpoN |
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| Protein accession | YP_003239562 |
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| Protein GI | 260893465 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTACCA AGGCCGACAT CCGACTGGAG ACAGCCCAGA AACTGGCTTT TCGTCCGGAA
CTGCAACAAG CGGTGGCGGT GCTGCAGTTC TCTACCCAGG AACTTTGGCA ATACGTGCAG
CAGCAGCTGA CGGAAAACCC CTTGCTCGAA CTGAAAGAGG AAGGGGAGGG CGGGGAACCA
CCGGAGGAAG AAGCTTCTGA GGACTCCTGG GTGGATTACC TTTGTGATGC CAGCGACTTG
GGTCTTAGCC AGCAAGAACC GGCTTCCTCA CCGGAGCCGG TGCCGGTGGC TCCCGGACCT
TCCCTTTACG AGCACCTGCT GCAGCAGCTG GCCTTCCTTC CCCTGAATAG CACCGAGCGG
GCAGTAGCTG AATTCTTGGC TGGGAACCTG GATCAGGACG GTTACTTGCG TCTTCCTTTG
GCGGAGGCGG CTTCTCTTCT GGGAATATCC GAAGAGGCGG TAGCCAGGGG GCTGAAAGTC
CTCCAGTCGC TGGAACCTCC CGGAGTAGGG GCGCGCGATT TGCGGGAGTG CTTGCTTTTG
CAGCTGGAGC GCAGCCACCC GGAGGACCAC CTGGCCCGCA AGCTGGTGGG AGAGCACCTG
GAGGAGCTGG CTGAAGGAGA ATGGGCTAAG CTTGTCCGGA AACTGGGCGT AAGCCAGGAA
GAGTTGGACC GGGCGGTAGA GAGGATCCGC CAGCTCAATC CCCGCCCGGG CAGTAACTTC
GGCAGCAACT GGGTAGAGTA TGTCGTCCCT GACATCGTCG TGCAGGAAGT GGAAGGGGAC
TACGAAGTCC TGCTCAACGA GTCTGTCTAC CCCCGTCTAG TGATCAACTC TACCTACCGC
GATCTCCTAC GCCATCCCCA ACTCGGTCCC GAGGCCAAGA CTTTCCTGCA GCAAAGACTG
AAGCAGGCCC TCTGGCTTAT AAAAAATCTG GAGCAGAGGC GCCTGACCCT TTATCGGGTC
GCCGTGGCGC TAGTAGAAAA GCAGCGCAGC TTTTTTGACC AGGGCCTCTC AGGTTTGAAA
CCCCTCACCC TCCGAGAGAT AGCGGAAGAG ATAGGGGTAC ACGAGTCTAC CGTCTCCCGG
GCCATAGCCA ACAAATATCT GCAGTGTTCC CGGGGGATCT TTCCCCTTCG CTTTTTCTTC
GCTAGCGGGG TCAGCAGTAG CCGGGGGCAG GAGGTGGCAG CACAGGCGGT CAAATGGCTG
ATCAAGCAGT TGATCGATAA GGAAGATCCT GCTGCTCCTT TAAGCGATCA GGCGATAGCT
AGAGAACTTA AAAGGCAGGG GATAGAGCTT TCCCGGCGCA CGGTGGCCAA ATACCGGATG
GAGATGGGGA TCCCAAATGC GGCAAAACGG AAAAGCCAGT AA
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| Protein sequence | MVTKADIRLE TAQKLAFRPE LQQAVAVLQF STQELWQYVQ QQLTENPLLE LKEEGEGGEP
PEEEASEDSW VDYLCDASDL GLSQQEPASS PEPVPVAPGP SLYEHLLQQL AFLPLNSTER
AVAEFLAGNL DQDGYLRLPL AEAASLLGIS EEAVARGLKV LQSLEPPGVG ARDLRECLLL
QLERSHPEDH LARKLVGEHL EELAEGEWAK LVRKLGVSQE ELDRAVERIR QLNPRPGSNF
GSNWVEYVVP DIVVQEVEGD YEVLLNESVY PRLVINSTYR DLLRHPQLGP EAKTFLQQRL
KQALWLIKNL EQRRLTLYRV AVALVEKQRS FFDQGLSGLK PLTLREIAEE IGVHESTVSR
AIANKYLQCS RGIFPLRFFF ASGVSSSRGQ EVAAQAVKWL IKQLIDKEDP AAPLSDQAIA
RELKRQGIEL SRRTVAKYRM EMGIPNAAKR KSQ
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