| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1595 |
|---|
| Symbol | |
|---|
| ID | 8491590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1581808 |
|---|
| End bp | 1582875 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 646359588 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_003239540 |
|---|
| Protein GI | 260893443 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGTTGC GCTTTCCCTG GACGACCAAC TGCGGCCTTT TCTTTACCCG CTACGAGGAA
GACCAGGCTT TCCTCCCCTC GCGGGCGGCC AAAATTAAAG TACTTTGCCT TTTTGCTTTG
CTTTTGGCTC TTCCCTGGCT GGTCGGGCCT TATCCTTTGC GCATAGCTAG CCAGGTGGCC
ATCATGGCCC TCGGGGCGGT GGGACTTAAT CTGCTTACCG GTTTTGCCGG GCAGATATCA
GTGGGGCACG CTGCCTTTAT GGGTGTAGGA GCCTACACGG TGGGGGCGCT TACCACCAAG
CTGGGGCTTT CCTTCTGGCT GGCCTTACCT TTAGGCGGGC TGGCAGCGGC TCTGGTAGGG
GCTTTTTTTG GCCTTCCTTC CCTGCGCCTG AAGGGGCTTT ACCTGGCCAT TGCTACCCTG
GCGGCTCAGG TTATACTAGA CTTTGCTTTT GTGCGGCTTG AACCCATAAC CGGAGGGGCG
GCCGGGCTGG TTCTTACCCC CCCGAGCCTG GGGCCTTTCT CTTTGGCCGA CGATACCGTC
TTCTACTATG TAGTCCTAGC CCTGGCGGTG GTCGGGGTCA TCTTTGCTCT TAACCTTTCC
CGCAGCCGGG TAGGGCGAGC TTTCATGGCC ATAAGGGATC GGGACTTAGC CGCGGCCATG
CTGGGGGTGG ACCTCTTCGG CTACAAGCTC CGGGCCTTTT TCTTGAGCTC CTTCTACGCC
GGTCTGGCGG GAGGAATGCT GGCCGCTTAT ACCCGCGTGG TCACCCCGGA GCAGTTCACC
CTGGACGTTT CCATACAGTT CCTGGCCATG ATCGTCATCG GGGGCCTGGG AGACGTCCTG
GGTTCGGTTT ACGGGGCGGC CTTCGTTTCC TTGCTCCCCA TAGCCTTGAG TTACCTGGCC
CAGGCCCTGC AGGGCGTCTT CCCACAGATG GTCAATCTTC TCTCGGCCTG CCAGACGGCT
CTTTTTGGCC TGGTGATCAT TCTCTTTCTG ATCTTCGAGC CCCAGGGCCT GGCCAAGCTC
TGGCGGCATG TCAAAGACTA CTTCCGCCTG TGGCCCTTCT CTTACTAA
|
|---|
| Protein sequence | MRLRFPWTTN CGLFFTRYEE DQAFLPSRAA KIKVLCLFAL LLALPWLVGP YPLRIASQVA
IMALGAVGLN LLTGFAGQIS VGHAAFMGVG AYTVGALTTK LGLSFWLALP LGGLAAALVG
AFFGLPSLRL KGLYLAIATL AAQVILDFAF VRLEPITGGA AGLVLTPPSL GPFSLADDTV
FYYVVLALAV VGVIFALNLS RSRVGRAFMA IRDRDLAAAM LGVDLFGYKL RAFFLSSFYA
GLAGGMLAAY TRVVTPEQFT LDVSIQFLAM IVIGGLGDVL GSVYGAAFVS LLPIALSYLA
QALQGVFPQM VNLLSACQTA LFGLVIILFL IFEPQGLAKL WRHVKDYFRL WPFSY
|
|---|
| |