| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1532 |
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| Symbol | |
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| ID | 8491526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | - |
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| Start bp | 1525099 |
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| End bp | 1528479 |
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| Gene Length | 3381 bp |
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| Protein Length | 1126 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 646359524 |
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| Product | DNA-directed RNA polymerase, beta subunit |
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| Protein accession | YP_003239477 |
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| Protein GI | 260893380 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATTC CTTCGTTCAA AGAAGGTTCG GGCGAACGGG TAAGCTACGG CAAGTTGCAG
GAAATCCTTC CTCTACCTGA CCTCCTAGAG ATCCAGCGTA AGTCTTACAG GTGGTTTCTG
GAAAAGGGCT TGCGGGAAGC CCTAGCCGAT ATCTCCCCCA TCCGGGACTT CACCGGTAAC
CTGATTCTGG AATTTCTTGA CTACACCTTG GGGCCGCCGA AGTACTCCGA GCAGGAGTGC
AAGGACCGGG ACATGACCTA CGCGGCTCCC CTCCGGGTCA AAGTACGCCT TATCAACAAG
GAAACGGGGG AGATCAAAGA GCAAGAGGTC TTCATGGGGG ATCTCCCCTT GATGACTGAG
CGGGGTACTT TCATCATTAA CGGGGCCGAG CGGGTGGTAG TGAGTCAGCT GGTCCGTTCC
CCCGGTGTTT ACTACGGGGA GCAGATAGAT CCTACGGGAA AGAAGCTTTA CACCGCTACC
ATCATCCCAA ACCGCGGAGC CTGGCTGGAG TTTGAGACTG ATGCCTCTGA CGTCATCTGG
GTACGGGTGG ACCGCACCCG CAAGATCCCG GCCACCACGC TGGTGCGGGC TCTGGGCTAT
CCTACCAACG CTCATATCCT GGAGCTTTTC GATCATGACA AGTTCATCCA GGAGACTTTG
AGCCGCGATC CTTCCACTAA CCAGGAAGAG GCCCTTTTGG AAATCTACAA GCGCCTGCGT
CCGGGTGAGC CGCCGGCGGT GGACAACGCG CGGGCGCTTC TGGAGAGCCT CTTTTTCGAC
CCCAAGCGCT ACGACCTGGG GAATGTGGGG CGCTACAAGC TCTTCAAGAA GCTGGGACAC
GGTATACTTT ACCGCTTCAA GCAAGAAAAC GGTCCGCAGG AATGGGATCC TTACCTCAAG
AAAATGGTCC CCAAGGACCG GGAGTTTATC CGGGAGCTCT TGCCAGAGGA CATCGTGGCC
ACCATCCGCT ACCTGCTCAA GGTCATGCGA GGCGAGGGCC AGGTGGATGA CATCGACCAC
CTGGGCAACC GACGGGTGCG CTCGGTAGGC GAGCTTTTAC AGAACCAGTT CCGGATCGGG
CTAGCGCGCA TGGAGCGGGT GGTCAGGGAA CGCATGACCA TCCAGGACGT GGAAGTAGTG
ACCCCGCAGG TCCTCATCAA CATCCGCCCG GTAGTAGCGG CCATAAAGGA ATTCCTCGGG
TCGAGCCAGC TCTCCCAGTT CATGGACCAG ACCAATCCTC TCTCCGAGCT CACGCACAAG
CGGCGTATCT CAGCCCTCGG GCCGGGAGGA TTGAGCCGGG AGCGGGCGGG CTTCGAGGTG
CGGGACGTGC ACCACTCCCA CTACGGGCGT ATTTGTCCCA TAGAAACACC GGAAGGACCT
AACATCGGCC TTATTGGCAG CCTCACTACC TACGCCCGGG TGAATGAATT TGGCTTCATT
GAAACTCCCT ACCGGCGGGT GGATAAGGAG AACCGCCGGG TAACCGATGA GATTGTTTAC
CTCACGGCGG ACGAAGAGGA GCAGTACGTG ATCGCGCAGG CCAACGTGGC CCTGGACGAA
GAAGGGCGCT TCCTGGAGGA CCGGGTGAGT GCTCGGTACA AGGGCGAGAT CTTGGTAGTT
CCAGTAGAAG AAGTGGACCT GGTGGACGTC TCGCCCAAGC AGGTCTTCAG CGTGGGAGCC
TCACTCATTC CCTTCTTGGA AAACGACGAC GCCAACCGGG CTTTGATGGG AGCCAACATG
CAGCGCCAGG CGGTTCCCCT CATCCGGACG GAGGCGCCGC TGGTAGGTAC GGGCATTGAG
GAAAAGGTGG CCCGCGATGC AGGAGCGGTA GTGGTGGCCC GGCGCTCCGG TACGGTTACC
AAGGTTACGG CCAACGAGAT CGTCATCACC ACCGATGACG GAGAGACCGA CCGCTACTCG
CTGCGGAAGT TCCAGCGCTC CAACCAGGGC ACCTGCATCA ACCAGCGCCC CATTGTCAAG
CGCGGCGACC GAGTGGAGGC CGGGCAAGTC ATAGCCGACG GTCCCTGCAC CGATCACGGG
GAGTTGAGCC TGGGAAGGAA CGTGCTGGTG GCCTTCATGC CCTGGGAGGG CTACAACTAC
GAGGACGCCA TCCTCATAAG CGAGAAGCTG GTGAAGGAGG ACTTCTTCAC CTCCATTCAC
ATAGAGGAGT ACGAGTGCGA GGCCCGGGAC ACCAAGCTCG GGCCGGAAGA AATCACCCGG
GACATCCCCA ATGTGGGTGA GGATGCCCTG AAAGATCTCG ACGAGCGGGG CATCATCCGC
ATAGGGGCGG AGGTGAGGCC AGGCGACATC CTGGTGGGCA AGGTGACTCC CAAGGGGGAG
ACCGAACTTA CGGCAGAAGA GAGGCTTTTA CGGGCCATTT TCGGCGAGAA GGCCCGCGAG
GTACGGGACA CCTCCTTGCG GGTTCCCCAC GGCGAGTCGG GTACGGTGGT GGATGTCAAG
ATCTTCAGCC GGGACAAAGG AGATGAGCTC CCACCGGGAG TCATCAAGCT GGTGCGGGTC
TATGTGGCCC AGAAGCGCAA AATCTCGGTG GGAGACAAGA TGGCGGGGAG GCATGGGAAC
AAGGGAGTGG TAGCCCGCAT CCTGCCAGAG GAGGACATGC CCTTCCTGGA GGACGGTACG
CCGGTGGAGA TCGTCCTTAA TCCCTTGGGA GTACCTTCCC GGATGAACCT GGGTCAGGTG
CTGGAAACCC ACCTGGGGTG GGCGGCGAAA AAACTGGGAA TCAAGATCTC CAGCCCCATC
TTCCACGGGG CCAAGGAAGA GGACATATTT GAGACCTTGG AACGGGCCGG TTTGCCTCGC
AACGGTAAGG TCACCCTTTA CGACGGCCGC ACGGGGGAAC CTTTCGATAA CCCGGTGACC
GTAGGTTACA TATACATGAT GAAGCTCGCC CATCTGGTGG ACGACAAGAT CCACGCTCGT
TCCACCGGCC CCTACTCCCT GGTCACGCAG CAGCCGCTGG GCGGTAAGGC GCAGTTCGGC
GGCCAGCGCT TTGGAGAAAT GGAGGTCTGG GCGTTGGAGG CCTATGGAGC GGCTTACACC
CTGCAGGAGA TGCTTACCGT GAAGTCGGAC GACGTAGTGG GACGGGTGAA GACATACGAG
GCCATCGTCA AAGGCGAAAA TGTGCCGGAG CCGGGCGTGC CCGAGTCCTT TAAAGTGCTG
ATCAAAGAGC TTCAGAGCCT GGGGCTGGAC GTCCGGGTGC TTTCCAGCCG CGGCGAGGAA
GTGGAGTTGA AGGACACCGA TAGTGAGGGA GAACCTGCGG AGAAAACAGA GTGGGACTTC
CATAAGCTTT ACGAGCCGAC GGAAGAAGAA TCGACGGAAG AGAAAGAAGA AAAGGGCAAG
GCCAAGAGAA AAACGAGGTG A
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| Protein sequence | MAIPSFKEGS GERVSYGKLQ EILPLPDLLE IQRKSYRWFL EKGLREALAD ISPIRDFTGN
LILEFLDYTL GPPKYSEQEC KDRDMTYAAP LRVKVRLINK ETGEIKEQEV FMGDLPLMTE
RGTFIINGAE RVVVSQLVRS PGVYYGEQID PTGKKLYTAT IIPNRGAWLE FETDASDVIW
VRVDRTRKIP ATTLVRALGY PTNAHILELF DHDKFIQETL SRDPSTNQEE ALLEIYKRLR
PGEPPAVDNA RALLESLFFD PKRYDLGNVG RYKLFKKLGH GILYRFKQEN GPQEWDPYLK
KMVPKDREFI RELLPEDIVA TIRYLLKVMR GEGQVDDIDH LGNRRVRSVG ELLQNQFRIG
LARMERVVRE RMTIQDVEVV TPQVLINIRP VVAAIKEFLG SSQLSQFMDQ TNPLSELTHK
RRISALGPGG LSRERAGFEV RDVHHSHYGR ICPIETPEGP NIGLIGSLTT YARVNEFGFI
ETPYRRVDKE NRRVTDEIVY LTADEEEQYV IAQANVALDE EGRFLEDRVS ARYKGEILVV
PVEEVDLVDV SPKQVFSVGA SLIPFLENDD ANRALMGANM QRQAVPLIRT EAPLVGTGIE
EKVARDAGAV VVARRSGTVT KVTANEIVIT TDDGETDRYS LRKFQRSNQG TCINQRPIVK
RGDRVEAGQV IADGPCTDHG ELSLGRNVLV AFMPWEGYNY EDAILISEKL VKEDFFTSIH
IEEYECEARD TKLGPEEITR DIPNVGEDAL KDLDERGIIR IGAEVRPGDI LVGKVTPKGE
TELTAEERLL RAIFGEKARE VRDTSLRVPH GESGTVVDVK IFSRDKGDEL PPGVIKLVRV
YVAQKRKISV GDKMAGRHGN KGVVARILPE EDMPFLEDGT PVEIVLNPLG VPSRMNLGQV
LETHLGWAAK KLGIKISSPI FHGAKEEDIF ETLERAGLPR NGKVTLYDGR TGEPFDNPVT
VGYIYMMKLA HLVDDKIHAR STGPYSLVTQ QPLGGKAQFG GQRFGEMEVW ALEAYGAAYT
LQEMLTVKSD DVVGRVKTYE AIVKGENVPE PGVPESFKVL IKELQSLGLD VRVLSSRGEE
VELKDTDSEG EPAEKTEWDF HKLYEPTEEE STEEKEEKGK AKRKTR
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