Gene Adeg_1531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeg_1531 
Symbol 
ID8491525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAmmonifex degensii KC4 
KingdomBacteria 
Replicon accessionNC_013385 
Strand
Start bp1521568 
End bp1525092 
Gene Length3525 bp 
Protein Length1174 aa 
Translation table11 
GC content61% 
IMG OID646359523 
ProductDNA-directed RNA polymerase, beta' subunit 
Protein accessionYP_003239476 
Protein GI260893379 
COG category[K] Transcription 
COG ID[COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit 
TIGRFAM ID[TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00270247 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGAGC TCGACCGTTT TGACCGCATA CGCATAGGGC TGGCTTCACC TGAGCAGATC 
CGGGCCTGGT CGCACGGCGA AGTGAAAAAA CCGGAAACCA TCAACTACCG GACGCTGAAG
CCCGAGCGCG ACGGCCTCTT TTGTGAGCGC ATTTTCGGTC CCACCAAGGA CTGGGAGTGC
TACTGCGGCA AGTACAAGCG GGTGAGGTAC AAAGGGGTTA TCTGCGACCG CTGCGGAGTG
GAAGTGACGC GGGCCAAGGT GCGCCGCGAG CGCCTGGGGC ACATTGAGCT TGCTGCTCCA
GTTTCCCATA TATGGTACTT CAAGGGAATT CCTAGCCGCA TGGGCCTGCT CCTAGACATG
TCCCCCCGGG CCCTGGAGAA GGTGTTATAC TTTGTCAACT ACATAGTGCT CGACCCGGGG
GACACTCCCC TGGTGAAGAA GCAGCTACTG ACCGACGCGG AGTACCGGGA GTACCGGGAG
AAGTACGGGG ACTCCTTCCG GGTCGGCATG GGGGCGGAGG CCATAAAGGA GCTCTTGGCA
GAAATCGATC TCGACCAGCT CGCCCAGGAG CTCCGGCAAG AGATTAAGGA GAGCACGGGG
CAACGGCGGG TAAGGGCCAT AAGACGCCTG GAGGTGGTGG AGGCCTTCCG CAAGTCGGGC
AACCGGCCTG AGTGGATGAT CCTGGAGGTG CTGCCGGTCA TCCCGCCGGA GCTCCGTCCC
ATGGTGCAGC TGGACGGCGG GCGCTTTGCC ACCTCCGACC TCAACGACCT TTACCGCCGG
GTGATAAACC GGAACAACCG CCTCAAGCGC CTCTTGGAGC TGGGGGCGCC CGACATCATC
GTGCGCAACG AGAAGCGCAT GCTGCAGGAG GCGGTGGATG CCCTTATCGA TAATGGCCGG
CGGGGGCGGC CGGTTACCGG CCCCGGCAAC CGCCCCTTGA AGTCTTTGAG CGACATGCTC
AAGGGCAAGC AGGGACGCTT CCGGCAGAAC CTCCTGGGGA AGCGGGTGGA CTACTCCGGC
CGCTCGGTCA TCGTGGTCGG GCCCACACTC AAGCTTCACC AGTGCGGCCT GCCGCGGGAA
ATGGCTTTGG AGCTTTTCAA GCCCTTTGTG ATGCACAAGC TTGTGAAGAA GGGACTGGCC
CACAACATCA AGAGCGCCAA GCGCATGGTG GAGCGCATGC GGCCTGAGGT CTGGGGTGTC
TTGGAAGAGG TGGTGAAGGA CCACCCCGTG CTCTTGAACC GCGCTCCCAC CCTGCACCGC
CTGAGCATCC AGGCTTTTGA ACCGGTCCTG GTGGAAGGAA GGGCCATCCA GATCCATCCC
CTGGTCTGCA CTGCCTACAA CGCCGACTTC GACGGCGACC AGATGGCAGT GCACGTGCCC
CTTTCGGCAG AGGCCCAGGC CGAAGCCCGG CTCCTCATGC TTTCCACCAA CAATATCCTC
TGCCCCAAAG ACGGCAAGCC CATCACCATT CCCACCCAGG ACATGGTGAT CGGCATTTAC
TACCTCACCT TAGAGAAGCC GGGAGAGTTC GTGGAGGACC GGTTCTTTGC CGACCCGGAC
GACGCCATCC GGGCTTACGA GATGGGTCTT GTACCTCTCC TGGCGCGGAT AAAGGTGCGC
CTGCCGGGGA TAAAACTGCC GGGGCGCTGG CTGGAAACCA CCCCTGGTAG GCTTATCTTC
TTCCAGGCAG TGCCGGAAGC CTTGCTAATT AAGCAGGACG AGGAAGGAAA CCGGGTACTT
ACCTCGCTTG CCCAGCGCAT CCTGAGCGAG GTGACAGATA AGAAGCTCCT GGTGGAGATC
ATTGACCGCT GCTACCGCCG GCTGGGGTTT GCCAAGACGG CCGAGTTCCT GGACAACATA
AAGGAGCTGG GCTTTCGCTT TGCCACCAGG GCGGGTTTGA CCATTGGTCT GGAAGACCTC
GAAGTGCCGG GGGAGAAGCC GGAGATATTG GCCCAGGCGG AAAAAGAGGT GGAGGAGGTC
GAACGGCAGT ACCGGCGGGG GCTCATTACC AAGGAAGAGC GTTACCGTAA GGTCATCGGC
ATATGGAGCG CTGTGACCGA GCGGATTAAG AACCTGCTGG TGGAAAAGCT CGACCAGTTC
AACCCCGTCT ACATGATGGC TATATCCGGC GCGCGGGGTA ACATCCAGCA GATAAGGCAG
TTGGCTGGCA TGCGGGGGCT CATGGCCGAT CCCTCGGGGC GGATCATTGA GGTACCCATC
AGGGCGAGCT TCCGCGAAGG GCTTACCGTG CTGGAGTACT TCATTTCTAC CCACGGCGCC
CGCAAAGGAC TGGCCGACAC TGCCTTGCGC ACCGCTGACT CCGGGTACCT CACCCGGCGG
CTGGTGGACG TGGCCCAGGA TGTGATCGTG CGGGAGGAGG ATTGTGGCAC CGACGATTAC
ATTGAAGTGG AAGACATCCG CGACGGCAAT GAGGTTATAG AGCCCCTGGC TGACCGGATC
CTGGGCCGCA TTGCGGCGGA GGACATAGTG GATCCGCAAA AAGGGACGCT TATCTGCGCC
AAGGGCGAAG AGATAGACGA AGAAGCGGTG GAGAAGATCA CAGCGGCCGG TATAAAGAAG
GTAAAGATCC GCTCGGTGCT CACCTGCCGC ACTCGGCACG GGGTTTGCGC TCGCTGCTAC
GGCCGCGACC TCGGTACCGG CTTCTTGGTG GAGATCGGCG AGGCGGTAGG GATCATTGCG
GCCCAGTCCA TCGGCGAGCC CGGTACACAG CTTACCATGC GCACCTTCCA CACCGGCGGC
GTGGCGGGTG AGGACATCAC CCAGGGTCTA CCGCGGGTGG AAGAGCTCTT CGAGGCCCGG
CGGCCGCGGG GCCAGGCCAT TATAGCGGAG GCGCCCGGCG TGGTAGAGGT GCGGGAGGTC
AAGGGACGGC GGGAGATCGA ACTCGTCAAG GATGATGGCG AGCGGGTGGT CTACCAGGTT
CCCTTCGGTG CCCGGATCAA GGTGAAGACG GGTGACCGGG TGGAGGCTGG CGATGAACTC
ACCGAAGGCT CGGTCAACCC GCATGACCTC TTAAGGATAA AGGGAATGAA GGCGGCGCAG
CTCTACCTCC TGCGGGAGGT GCAGCGCGTT TACCGCATGC AAGGGGTGGA GATCAACGAC
AAGCACATAG AGATCATCAT CCGCCAGATG TCCAAGAAGA TAAAGGTAGA GGATCCGGGC
GACACCGAGC TTCTGCCGGG AAGCCTGGTA GACTGGTACG AGTTTGAGGA CGAGAATGCC
CGGGTAGAAG CTCAGGGCGG GCAGAAGGCT GTGGGCCGCC CGGTGATTCT GGGGATTACC
AAGGCTTCCT TGGCCACAGA CTCTTTCCTG GCCGCGGCTT CCTTCCAGGA GACCACCCGG
GTGCTGACCG ACGCAGCTAT CAAGGGTAAG GTTGATCCGC TGATCGGCCT CAAAGAGAAC
GTGATCATAG GGAAACTCAT CCCTGCGGGT ACGGGTCTCA ACCGTTACCG CAGCATCAAA
GTGGTGGCCG AGGAAGAGAA GAAAGCGGCA GCCGAAGAGG CCTAA
 
Protein sequence
MLELDRFDRI RIGLASPEQI RAWSHGEVKK PETINYRTLK PERDGLFCER IFGPTKDWEC 
YCGKYKRVRY KGVICDRCGV EVTRAKVRRE RLGHIELAAP VSHIWYFKGI PSRMGLLLDM
SPRALEKVLY FVNYIVLDPG DTPLVKKQLL TDAEYREYRE KYGDSFRVGM GAEAIKELLA
EIDLDQLAQE LRQEIKESTG QRRVRAIRRL EVVEAFRKSG NRPEWMILEV LPVIPPELRP
MVQLDGGRFA TSDLNDLYRR VINRNNRLKR LLELGAPDII VRNEKRMLQE AVDALIDNGR
RGRPVTGPGN RPLKSLSDML KGKQGRFRQN LLGKRVDYSG RSVIVVGPTL KLHQCGLPRE
MALELFKPFV MHKLVKKGLA HNIKSAKRMV ERMRPEVWGV LEEVVKDHPV LLNRAPTLHR
LSIQAFEPVL VEGRAIQIHP LVCTAYNADF DGDQMAVHVP LSAEAQAEAR LLMLSTNNIL
CPKDGKPITI PTQDMVIGIY YLTLEKPGEF VEDRFFADPD DAIRAYEMGL VPLLARIKVR
LPGIKLPGRW LETTPGRLIF FQAVPEALLI KQDEEGNRVL TSLAQRILSE VTDKKLLVEI
IDRCYRRLGF AKTAEFLDNI KELGFRFATR AGLTIGLEDL EVPGEKPEIL AQAEKEVEEV
ERQYRRGLIT KEERYRKVIG IWSAVTERIK NLLVEKLDQF NPVYMMAISG ARGNIQQIRQ
LAGMRGLMAD PSGRIIEVPI RASFREGLTV LEYFISTHGA RKGLADTALR TADSGYLTRR
LVDVAQDVIV REEDCGTDDY IEVEDIRDGN EVIEPLADRI LGRIAAEDIV DPQKGTLICA
KGEEIDEEAV EKITAAGIKK VKIRSVLTCR TRHGVCARCY GRDLGTGFLV EIGEAVGIIA
AQSIGEPGTQ LTMRTFHTGG VAGEDITQGL PRVEELFEAR RPRGQAIIAE APGVVEVREV
KGRREIELVK DDGERVVYQV PFGARIKVKT GDRVEAGDEL TEGSVNPHDL LRIKGMKAAQ
LYLLREVQRV YRMQGVEIND KHIEIIIRQM SKKIKVEDPG DTELLPGSLV DWYEFEDENA
RVEAQGGQKA VGRPVILGIT KASLATDSFL AAASFQETTR VLTDAAIKGK VDPLIGLKEN
VIIGKLIPAG TGLNRYRSIK VVAEEEKKAA AEEA