Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeg_1508 |
Symbol | rplR |
ID | 8491502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ammonifex degensii KC4 |
Kingdom | Bacteria |
Replicon accession | NC_013385 |
Strand | - |
Start bp | 1509016 |
End bp | 1509381 |
Gene Length | 366 bp |
Protein Length | 121 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 646359500 |
Product | 50S ribosomal protein L18 |
Protein accession | YP_003239453 |
Protein GI | 260893356 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0256] Ribosomal protein L18 |
TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.175326 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCGAAGC AGGTGAACCG GAGAGAGCAA CGGGAAAAGA GACGCCTGCG GGTGCGCAAG AAGATCCACG GCACGGCCGA GCGCCCGCGG CTTAACGTCT TCCGGAGCTT GAAGCACATC TACGCTCAGA TAATCGATGA CGATCGGGGA GTGACGCTGG TGTCCGCTTC CTCCCTGTCC CCTGAATTGC GGGGCAAGAT CAACGGCGGC AACGTGGAGG GAGCGGCGGC GGTAGGCAGG CTCTTGGCGG AAAAGGCTCG GGCCAAAGGG ATAACCAAAG TGGTCTTCGA TCGCGCCGGC TACAAGTACC ATGGGCGCGT GAAGGCGCTG GCCGAGGCGG CGCGCGAGGG CGGCTTGGAA TTTTAG
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Protein sequence | MPKQVNRREQ REKRRLRVRK KIHGTAERPR LNVFRSLKHI YAQIIDDDRG VTLVSASSLS PELRGKINGG NVEGAAAVGR LLAEKARAKG ITKVVFDRAG YKYHGRVKAL AEAAREGGLE F
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