| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1494 |
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| Symbol | |
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| ID | 8491488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | - |
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| Start bp | 1501477 |
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| End bp | 1502256 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 646359486 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_003239439 |
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| Protein GI | 260893342 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.643957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGTAC GGCACGTGGC CCTAAAAGTG GCCTATGACG GCACCGCCTT TTCTGGCTTC
CAGCGCCAGC CCGGGCTCCG GACCGTGCAA GGGGTCCTGG AAGAAGCCCT GGCGCGCCTC
ACCAAGGAGA CATGCCAGGT CAAGGGGGCA GGGCGCACTG ACGCGGGAGT ACATGCGGAA
GGGCAGGTAG TTTCCTTCCG GACAGCCAGC AGCATCCCTA CCCCCCGCCT GGTGCCGGCT
CTTAACGGCC TTCTGCCGCC GGATGTGGCG GTGCTGGCGG CGGCCGAGGT GCCGGAGCAA
TTCCATCCCC GTTACGACGC GGTGAGCAAG GTCTACCGCT ATACTTTTTT CCGGCGGGCA
GTACGCTGCC CGCTAACGCG CTTCTACGCC TTACACGTTC CCGAGCCTTT AGACGTAGAA
CGCATGCGCG AAGCCGCTGC TTACCTAGGG GGAAGGCACG ACTTCCGCGC CTTCCAAAAT
ACGGGCCGAC CGGTTAAGTC CAGTGTGCGA ACGGTATTTT CCTGCCGCTT AGAGGAGGCT
GGTCCCTTTC TTTACTTCTG GATAGAAGCG GACGGCTTTC TTTACCAGAT GGTGCGCGTT
ATAGCGGGGA CCCTGCTGGA AATAGGGCGG GGGAAGCTTG AGCCCTCGGT CATCCTTGCC
GCCCTGGAAA AGGGGGAACG GCAGCTACTG GGGCCCACGG CACCCCCTCA TGGTCTTTGC
CTGGTGCAGG TCAAATATCC GCAAGACCCT TTCGGAGAGG ATGATGCCCC GTGCCGGTAA
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| Protein sequence | MTVRHVALKV AYDGTAFSGF QRQPGLRTVQ GVLEEALARL TKETCQVKGA GRTDAGVHAE
GQVVSFRTAS SIPTPRLVPA LNGLLPPDVA VLAAAEVPEQ FHPRYDAVSK VYRYTFFRRA
VRCPLTRFYA LHVPEPLDVE RMREAAAYLG GRHDFRAFQN TGRPVKSSVR TVFSCRLEEA
GPFLYFWIEA DGFLYQMVRV IAGTLLEIGR GKLEPSVILA ALEKGERQLL GPTAPPHGLC
LVQVKYPQDP FGEDDAPCR
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