| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1488 |
|---|
| Symbol | |
|---|
| ID | 8491481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 1496474 |
|---|
| End bp | 1497253 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 646359479 |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003239433 |
|---|
| Protein GI | 260893336 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGATCTCC TTGTTGTAGA TCGGGTAGTA AAGAACTTCG GCGGGCTGCG GGTGCTCAAC
CAGACCAGCC TTACCGTCAA AAAAGGGACG GTTACCGCCC TAGTAGGTCC CAACGGCAGC
GGCAAGAGCA CCCTCTTCAA CGTGATCTAC GGTTTGGCTC CCGCCGACGA AGGAGAAGTT
TACTTCCAGG GGAAGAAAAT CACCCGCTAC CCGCCTTACC GGATATACCG GGAGGGCTTA
GCGCTGGCCT TCCAACTCCC CCGCCTCTTT GACCAACTCC CCATTCTAGA TAACCTCTTG
CTCGCCGCCC CAGTAAACAG CGGCGAAAAT CCGATTAGGG CCTTGTTTAC CCGTCCCCGG
TGGCAGGAGG AAGAAAGGGC ACTGGCCCGC CAGGCTTATG AAGTGCTGGA ACTTCTGGAG
CTCACCCCAT TGGCTTTGCG CCCCACGGGG CAGCTCTCCG GCGGTCAGCG CAAGCTAGTG
GAGATCGGGC GGGTGCTGAT GGCCAAGCCG GAGATGATTC TGGTGGACGA GCCAGCAGCG
GGAATCAACC CGGTCCTGGC CCGGAAAATT TACGCCACCT TGAAAAAGCT ACAACAGGAA
AAGGGCTTGA CCCTTTTCAT CATCGAGCAC CGTCTGGAAG TCCTTTTCGA CTTTGCCGAC
TATGTCTACC TCATGGACGC CGGCCGGGTG GTACTGGAAG GAACTCCAGA AGAGGTGCTC
GCTCATCCCG ATTTCTACAC CATTTATGCG GGAGAGAGTC GGCCATGGCG TGTCTTGTAA
|
|---|
| Protein sequence | MDLLVVDRVV KNFGGLRVLN QTSLTVKKGT VTALVGPNGS GKSTLFNVIY GLAPADEGEV
YFQGKKITRY PPYRIYREGL ALAFQLPRLF DQLPILDNLL LAAPVNSGEN PIRALFTRPR
WQEEERALAR QAYEVLELLE LTPLALRPTG QLSGGQRKLV EIGRVLMAKP EMILVDEPAA
GINPVLARKI YATLKKLQQE KGLTLFIIEH RLEVLFDFAD YVYLMDAGRV VLEGTPEEVL
AHPDFYTIYA GESRPWRVL
|
|---|
| |