| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1430 |
|---|
| Symbol | |
|---|
| ID | 8491423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1434606 |
|---|
| End bp | 1435373 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 646359426 |
|---|
| Product | ApbE family lipoprotein |
|---|
| Protein accession | YP_003239380 |
|---|
| Protein GI | 260893283 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2122] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000126798 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGAAA AGCGCCGGGT TTACCGGGCT TGGCTAAGGC AAGAGGATCT TACCTTTTTC
GAGGTAAAGG TCAAGGAAAC CGATCTTTTG CTGGGGGTCC GGCGTGAGCG TTTCTCCCCC
TCCTTGGTCT GGAAAGTGGA GAAATTGGTG CGGGAGCAGC GGCAGCTTTT GGAAGAATAC
TTGAGGCGCG ATCCCGCTTT TGCCACTGCG CTCACGCCTC ACCAGGTCCT TCCTGATGCT
CCACCGATAG CTTGGGCCAT GGCGGAGGCG GCGAGGCTTG TCGGGGTAGG ACCGATGGCG
GCGGTGGCTG GGGCCTTCGC CGATCTGGTA GGCAAGTATC TGGGCCGTTT TTCCCGGGAG
GTAGTGGTGG AAAACGGCGG GGACATTTAC CTTAAGAGCA CGCGCCAGAG GACGGTGGGC
ATCTATGCTG GCAATTCTCC CCTCTCCTCC CGGGTGGCGC TAGCTATTCC GGCCAATCTT
ACTCCTCTGG GAATTTGTAC CTCTTCAGGC ACGGTGGGAC ACTCCTTAAG CTTTGGAAAG
GCCGACGCGG CGGTGGTGCT GGCCTCTACC GCTACCCTCG CCGACGCGGC GGCTACTGCC
TTGGGCAACC GGGTCCAGAC GCCTGAAGAT ATAGAAGAAG CCCTTTCTTT TATCCAGAAA
ATTCCCGGAG TTCTAGGAGC GGTGGTCATC ATCGGGAAGC ACCTGGGAGT CTGGGGCAAG
GCGAGGCTTG TGCCGTTGGA ACCTGGTCAG GCAGTGACCG AGAAATAG
|
|---|
| Protein sequence | MPEKRRVYRA WLRQEDLTFF EVKVKETDLL LGVRRERFSP SLVWKVEKLV REQRQLLEEY
LRRDPAFATA LTPHQVLPDA PPIAWAMAEA ARLVGVGPMA AVAGAFADLV GKYLGRFSRE
VVVENGGDIY LKSTRQRTVG IYAGNSPLSS RVALAIPANL TPLGICTSSG TVGHSLSFGK
ADAAVVLAST ATLADAAATA LGNRVQTPED IEEALSFIQK IPGVLGAVVI IGKHLGVWGK
ARLVPLEPGQ AVTEK
|
|---|
| |