| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1429 |
|---|
| Symbol | |
|---|
| ID | 8491421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 1433057 |
|---|
| End bp | 1434418 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 646359424 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_003239379 |
|---|
| Protein GI | 260893282 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00143286 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGTTA ATTATGATGT GGTGGTAATA GGTGGAGGAA CAGCAGGAGT GACCGCCGCC
ACTACGGCGC GGCGCCACTA CCCGGATAAA AAGGTTTTGC TTATCCGGCG GGAGGAAAAG
ACCCTTATCC CCTGCGGCAT CCCCTACATG TTTGGAGTCT TAGACGATCC CTGCAAAAAT
GTAAATCCAG ACTATATCCT GAGCATCCGG GGAATCGAAG TCAAAGTGGG AGAAGTAAAG
GAGATCGTGC GGCAGGATAA AAAGCTGGTG ATGACCTCAG GGGAGGAAAT CGGTTATGAC
CGCCTAGTCC TGGCTACCGG TTCCCGCCCC GCCTTGCCCG CCATACCTGG CATCGACCAG
GAAAACGTTT TTTGGATAAA GAAGGAGCTG CCCTATCTCC AGAAAGTGCT TGCCGCCCTG
GCCGAAGCCC GCCGGGTAGT GATAATCGGC GGGGGATTCG TAGGAGTGGA ACTGGCAGAG
CAAATCAGAA AATACCGGCA ACTGGAGGTC ACCATAGTAG AAATTCTGCC TTATTGTCTC
TACACTTCCT TCGACGAAGA GTTCTGCTTC GAAGCCGAGC GAGAACTCCA GGCCCTAGGG
GTGGACATAC TCACCGAAAA GAAAGTGGCG GAACTGGCCG GCAATGGCAA AGTAAAAGAG
GTAAGGCTGG AAGACGGCAC CGTGCTGCCC GCCGACGTGG TCATAATAAC CACGGGGGTG
CGGCCGGTGA CCGAGCTGGC CGAGGCTGCC GGGCTTTCTC TGGGTCCCAC CGGGGGAATC
CTGGTGGACC GAACTATGGC CACCTCCGAT CCTAACATCT TCGCCTGCGG CGACTGCGCC
GAAAAGTTCT CCTTCTTCGG CGGTAACCCG GTGCGTATAC GCTTAGCCTC GGTGGCCGCC
ATGGAGGCGC GGGTAGCCGG CGCCAACCTC TTCGCCCGCC GCCGGGAGAA CCCCGGTACG
GTAGGGGTCT TCTCCACCAG GATCGGCGAT AAGGCCTTCG GCGCCGCCGG GCTCATCGAG
CGGATAGCCG AGGAGGAAGG ATACGACGTG CTGCTGGGGG AGGCTTCTGC CCCCAACCGC
CACCCTAGCG CCCTTCCCGG AACCTTCGAC ACCAAGGTGA AACTGGTGTT TGACCGCTAC
ACCGGCATCC TGCTGGGAGG GCAAGCGGTA GGCAGCGAAA GCGTGGGCGA GCTCGTGAAT
CTCTTGAGCG CTTGTCTGCT GCACCGCATG ACGGCCGTGG AAATGGCCGC CTTCCAGATG
GGGACTCACC CCCTCCTCAC CCCCTCCCCG CCGGCCTACC CGCTAGTAGT GGCGGCAGAG
GAGGCAGCGG TGGCCAAGCT GGAGAAGAAA CGGGAAGAGT AA
|
|---|
| Protein sequence | MKVNYDVVVI GGGTAGVTAA TTARRHYPDK KVLLIRREEK TLIPCGIPYM FGVLDDPCKN
VNPDYILSIR GIEVKVGEVK EIVRQDKKLV MTSGEEIGYD RLVLATGSRP ALPAIPGIDQ
ENVFWIKKEL PYLQKVLAAL AEARRVVIIG GGFVGVELAE QIRKYRQLEV TIVEILPYCL
YTSFDEEFCF EAERELQALG VDILTEKKVA ELAGNGKVKE VRLEDGTVLP ADVVIITTGV
RPVTELAEAA GLSLGPTGGI LVDRTMATSD PNIFACGDCA EKFSFFGGNP VRIRLASVAA
MEARVAGANL FARRRENPGT VGVFSTRIGD KAFGAAGLIE RIAEEEGYDV LLGEASAPNR
HPSALPGTFD TKVKLVFDRY TGILLGGQAV GSESVGELVN LLSACLLHRM TAVEMAAFQM
GTHPLLTPSP PAYPLVVAAE EAAVAKLEKK REE
|
|---|
| |