| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1413 |
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| Symbol | |
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| ID | 8491405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | - |
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| Start bp | 1415660 |
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| End bp | 1416169 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 646359409 |
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| Product | 16S rRNA processing protein RimM |
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| Protein accession | YP_003239364 |
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| Protein GI | 260893267 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00447303 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGCCGG ATTTTATAAC CGTAGGGGAG ATCGTGGCCC CGCATGGTTA CCGGGGGGCC
CTCAAAGTCT TACCCCTGAC CGACTTTCCG GAGCGCTTTT TGGGAATGAA AGAAGCCATG
GTCTTGCTTA AAGGCCGGCG CACCACCTAC ACGGTAAAGA GGGCGCGGCT GCACGGGAAG
TTCGTCCTGC TGGAGCTGGT CGGGGTGGAA AGAATGGAGG AAGCAGAGGC TCTGCGTGGG
GGGCTGGTGC AGGTGCCCAG GGAGGAAGTA TACCCTCTCC CCCCTGGGCA CTACTATATC
TTCGACCTGA TCGGCATGGA GGTCTTCACC GAAGAAGGAG CCTTCCTGGG GAAGATAGAG
GCGGTGCTGA GCACGCGGGC CAACGACGTC TTTAGCGTCC GCTCCCCGGA GGGGAAGGAA
ATTCTCATCC CCGCCCTTAA GACGGTTGTA TGTTCGGTGG ACGTGCCCGG CCGGAAGATG
ACGGTAAAGC TCCCAGAAGG ACTTTTGTAG
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| Protein sequence | MRPDFITVGE IVAPHGYRGA LKVLPLTDFP ERFLGMKEAM VLLKGRRTTY TVKRARLHGK
FVLLELVGVE RMEEAEALRG GLVQVPREEV YPLPPGHYYI FDLIGMEVFT EEGAFLGKIE
AVLSTRANDV FSVRSPEGKE ILIPALKTVV CSVDVPGRKM TVKLPEGLL
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