Gene Adeg_1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeg_1397 
Symbol 
ID8491389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAmmonifex degensii KC4 
KingdomBacteria 
Replicon accessionNC_013385 
Strand
Start bp1398460 
End bp1399290 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content61% 
IMG OID646359394 
Producthemolysin A 
Protein accessionYP_003239349 
Protein GI260893252 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTCCA GAAGAAGGCG TCTCGATATT CTGCTGGTGG AGCAAGGATA CTTCCCCAGT 
CGCGAGCGGG CAAGGCAGGC TATTCTGGCG GGCCAGGTCC TGGTCAACGG CCAGCGGGCC
GCTAAACCCG GGAGAATGGT GGGCCCAGAA GACCGGGTAG AGGTGCTTAG AGGAACGGAA
GAGCCCCCTT ACGTCTCCCG CGGAGGAGAA AAGCTGGCCC ACGCCTTGCG CTTTTTCGGC
ATTGATCTGA AGGACTTGGT GGTCATAGAC GTGGGAGCTT CCACCGGCGG CTTTACCGAC
TGCGCCCTGC GTGCCGGGGC CCGCAAGGTT TTCGCCGTGG ACGTCGGTTA CGGGCAGCTC
GACTGGCGGC TGCGCCAGGA TCCCAGGGTG GTGGTGCTGG AACGCACCAA CATACGCTAC
CTTTTGCCCG AAACCCTGGG GGAACTGGCC GACTTTGCTA CTATAGACGT GAGTTTCATC
TCTCTAACCA AGGTACTGCC GGCGGTGGGG AGGCTGCTGA AGCCGGAGGG CAGGGGCCTG
GCCCTCATCA AGCCCCAGTT CGAAGCGGGG CCGGAAAAGG TGGGCAAAAA GGGGGTAGTG
CGCGATCCGG CGGTCCACGT GGAGGTTTGC CACAAAGTGC TGGACTTTTT GCGGGAACAA
GGATGGGAGG TGCGGGGCCT CACCTTTTCT CCTTTGCGCG GCGGGGAGGG AAACATCGAG
TTTTTCGTTT ACTTTAGCCT GGTGCCCGGC TGTCCTTGGC CGGGGACGGT AGAGGAAGTA
GTAGCTGAAG CGCACACCTA CTTTGCCGAG AAAGGTCGGA AGCCGGAATG A
 
Protein sequence
MTSRRRRLDI LLVEQGYFPS RERARQAILA GQVLVNGQRA AKPGRMVGPE DRVEVLRGTE 
EPPYVSRGGE KLAHALRFFG IDLKDLVVID VGASTGGFTD CALRAGARKV FAVDVGYGQL
DWRLRQDPRV VVLERTNIRY LLPETLGELA DFATIDVSFI SLTKVLPAVG RLLKPEGRGL
ALIKPQFEAG PEKVGKKGVV RDPAVHVEVC HKVLDFLREQ GWEVRGLTFS PLRGGEGNIE
FFVYFSLVPG CPWPGTVEEV VAEAHTYFAE KGRKPE