| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1388 |
|---|
| Symbol | |
|---|
| ID | 8491380 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1389651 |
|---|
| End bp | 1390475 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 646359385 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003239340 |
|---|
| Protein GI | 260893243 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTTTCC TTTTGACCGG TGTGGGGCTG GGCTTTCTCT TTGCCTGGGT GGAAAGGGGG
CTGTTTCTGG GCCTTTTAGA GAGGGGTCAG GCGCTTCGCC CGAACTTCAA AGGGAAGCTT
ATTCCAGTAA GCGGGGGTCT TATCTTTTTC TTTTCCCTTT TGCCAACTCT TTTATTGCTC
GACCTCTTCT TCCCGGGAAG GATGGAGAAA GCTCAGCTTC TGGCCTTTCT CTTTTTCACC
GCCCTCACCA CGCTGGTGGG GTTAATAGAC GACCTTCTGG GCAGCCGTGA AGCCTCCGGA
CTGAAGGGAC ACTTCAAGGA GCTTTTGCGG GGAAGGCTTA CCACGGGGGC GCTCAAGGCG
CTGGCTGTCG TGATCGCGGC CCTTATCCTT TTTCTTCCCT ACTCTGCCTC GGTCGGGGAG
GCTCTGCTTA ACACTCTGCT CGTCGCTCTG TGGGTTAACA CTTTAAACCT TTTCGACCTG
CGGCCGGGTC GGGCGGGGAA GGTGTTTATC TTGGCCTGGC CCTTCTTTTC TTGGGCCGCC
TGGGGTAAGC CAGAACTCGC TTTCCTGTGG GCGACGGGTG GGGTTCTGCT GGCCTTTTTA
CCTTTCGATC TGCGGGCCAG GGCCATGATG GGAGACGCGG GGTCCAATAC TTTAGGAGGG
GTCCTCGGCC TGCTGGCGGC TTGGACCCTG GGCTTACGGG CTAAAATCAT CCTTTTATTG
GTTTTGCTCT TGCTTCATTT CCTCACCGAG CGTTACTCTC TTACTACCAT TATCGCCCGC
AACCGCTGGC TTGACTTTCT CGATCGCCTA GGGCGGCGGG ATTGA
|
|---|
| Protein sequence | MSFLLTGVGL GFLFAWVERG LFLGLLERGQ ALRPNFKGKL IPVSGGLIFF FSLLPTLLLL
DLFFPGRMEK AQLLAFLFFT ALTTLVGLID DLLGSREASG LKGHFKELLR GRLTTGALKA
LAVVIAALIL FLPYSASVGE ALLNTLLVAL WVNTLNLFDL RPGRAGKVFI LAWPFFSWAA
WGKPELAFLW ATGGVLLAFL PFDLRARAMM GDAGSNTLGG VLGLLAAWTL GLRAKIILLL
VLLLLHFLTE RYSLTTIIAR NRWLDFLDRL GRRD
|
|---|
| |