| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1362 |
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| Symbol | |
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| ID | 8491354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | - |
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| Start bp | 1365451 |
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| End bp | 1367442 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 646359359 |
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| Product | TRAG family protein |
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| Protein accession | YP_003239314 |
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| Protein GI | 260893217 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.824009 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTCC TGCCTGTGCT TTTCAACAGA CCGGGGAGAG TTCTGGTGCC CTCCCTGGTC
TTGCTTGTAT TTACTCTGGT GGCTGGCTTC TGCTGGTCCT ACCCGCTGCT CCTGCTGTGG
GCTGGCGCTG TGGCGTGGAC GGCGTGGCAG AGGCGTAAAG ACGCCGTGCT GGCCTGCCTG
CTCCCCTGGC TCCTCGCAGC GCTTTTCTAT AACGCCGGGG CGCTCATCTT TAGCCTCGCG
GCCCTGGCCA AAGGGGGTGC GATGCCTGCG GCGAAGTTCT GGGACTGGGG CTGGCTCGGC
CTCGCTCCCC TCTCTCCGCC CGACTCCTGG GCCAGGGCTG GGCTGGTGGT AGGGATGCCG
GCTTCTCTGC TGCTGGGCAG GCTTAGGCGC ACTACCCGGC ACGACGAGAG GCACGTGCAT
GGGCTTAGAG TAGCGGACAG TCCTGCAAAG GGCACCGGCA GGTGGGGCTC CGACAGGGAC
GTGGCGGACG TCTGTGAGTT CGGCCCTCCC GGGCCCGGCC ACGGCGGCGT AGTGCTCGGC
AAGCTCAAGG GGCGTATAGT GCGTGCAGTG CCGGAAAAGG CCCCGACAGT CAAGCGGCCC
GCCCACGCCC TCGCCGTTGC GGGCTCCGGC GGTGGCAAGA CCTTCTGCTT CGTGGTGCCG
AACGTCATCG CAGGCGCCTG CGATGGAGAG AGTCTAATCG TCACCGACCC CAAGGGAGAG
CTCACACCCC TGCTGGCCCC CTGGTTGCGG AAACGCATGG GCTACAAGGT CTTCGTCTTC
AACCTTGCCG ACCCGCGCCA CTCCAGTTTT TGGAACCCAC TGCTGGAGTG CAGGACGCCC
GTCGAAACCT ACCAGGCGGC CCAGGTGCTG GTCCTCAACG CCCAGGAGAG AGGGAAGGGG
AGTCCCTTCT TTACGGCGCT GGAGATCCAG GCTCTTACAG CACTGATGTC CCTGCTCCGT
GCGGACTTTC CGGAAGATCA GGCGCACCTC CGGAGTGTGC TGAGCCTGCT CTCGTGGCCG
AAGAACCGGC TCAAGGAGCG GTTCGACTCT GCGTACCGCG CCGGCAAGCT GGACGTAGAA
GGCCACGAAG CGTTCCGGGG GGCCTACAGC CACTGGGAGA ACGCCGTGGC CGGGCTCACT
TCCAAGCTCG CCCTCTTCCG CGACCCCGAC CTGGCCAGGC TTTTAAGCCG CCAGGAGCTG
GATCTGGAGG CGTTCGGGAA GGAAAAGGCG GCACTCTTCT GTGTGCTGCC GGTGGGTTCG
GATTACCTGC GCCCCATCCT GGCCGTGTTC TACCACTTCC TGCTGGACCG TCTCTACACC
CTGGCTCGGT CTTCTCCCGG CCAGCGGCTG CCCGTCCCGG TGCGCCTGAT CCTGGACGAG
TTCGCAAACA TCGGCCGTAT ACCTAAGTTT CAGGAGATTA TGGCCACCGC GCGGGGGTTG
GGTATCAAGG TGCTCTACGT GCTCCAGGAA CTTCAGCAGC TTAAGGATAA CTACCCCGGG
GAGGACATGA GCATCCTGGG CAACACCTTC GTCAAGGTCT ACCTGGGCGG CTCGGAGAAA
CCCACGCGGG AATACTTCAG CCGGGAGTTG GGTGAGGCCG CCGTGTACGT GGAAACCGAA
CGGCAAGACG TGACGCATCC CTGGAACCGG CTCGAAGCTC CGAAGCGGAC CAGAACTGTG
GTGCGCCGGG CGCTCATGGA GGCCGACGAG CTCGGCCGGC TGCCGGAAAA GAACTGCGTG
GCCTTGCTTC AGGGACACTA CCCGCTGTAC CTAGAAAAGT GTGGCTGGAC GGAGCTTCCG
CAGGCGAGGG AGATACGCGA ACTCGCGGGC CGGACGGTGG CAGACGTCGT AGAGGCCAGA
CCGGATGTCC AGCTCCAGCT ACCGCCCTAC CCGGAGGGAG AGGACGAGGA TGGTAAGCCG
GGAAACCAGG AGCCTAGGGT TCGGTCAGGA GCCGACGACG GCGATTTTAT CCGCTGCCTC
TTTCTGCCCT GA
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| Protein sequence | MRFLPVLFNR PGRVLVPSLV LLVFTLVAGF CWSYPLLLLW AGAVAWTAWQ RRKDAVLACL
LPWLLAALFY NAGALIFSLA ALAKGGAMPA AKFWDWGWLG LAPLSPPDSW ARAGLVVGMP
ASLLLGRLRR TTRHDERHVH GLRVADSPAK GTGRWGSDRD VADVCEFGPP GPGHGGVVLG
KLKGRIVRAV PEKAPTVKRP AHALAVAGSG GGKTFCFVVP NVIAGACDGE SLIVTDPKGE
LTPLLAPWLR KRMGYKVFVF NLADPRHSSF WNPLLECRTP VETYQAAQVL VLNAQERGKG
SPFFTALEIQ ALTALMSLLR ADFPEDQAHL RSVLSLLSWP KNRLKERFDS AYRAGKLDVE
GHEAFRGAYS HWENAVAGLT SKLALFRDPD LARLLSRQEL DLEAFGKEKA ALFCVLPVGS
DYLRPILAVF YHFLLDRLYT LARSSPGQRL PVPVRLILDE FANIGRIPKF QEIMATARGL
GIKVLYVLQE LQQLKDNYPG EDMSILGNTF VKVYLGGSEK PTREYFSREL GEAAVYVETE
RQDVTHPWNR LEAPKRTRTV VRRALMEADE LGRLPEKNCV ALLQGHYPLY LEKCGWTELP
QAREIRELAG RTVADVVEAR PDVQLQLPPY PEGEDEDGKP GNQEPRVRSG ADDGDFIRCL
FLP
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