Gene Adeg_1308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeg_1308 
Symbol 
ID8491300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAmmonifex degensii KC4 
KingdomBacteria 
Replicon accessionNC_013385 
Strand- 
Start bp1311992 
End bp1312654 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content55% 
IMG OID646359310 
Productredox-sensing transcriptional repressor Rex 
Protein accessionYP_003239265 
Protein GI260893168 
COG category[R] General function prediction only 
COG ID[COG2344] AT-rich DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.727677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGTCT TGCGCGTTCC GGAAGCAACC ATCGGGCGAC TTTCGGTTTA CTCCCGCTAT 
TTAGAGCAGC TGGATAAAAA CGGAGTTACC ACGATATCTT CTGGGGAGAT CGCCAAAGGG 
GTGGGAGTAA GCCCGGCGCA GGTCAGGAAA GATCTGGCCT ACTTCGGTGA GTTCGGTACC 
CGCGGGGTGG GCTATAACGT TAAAGATCTC ATTCGCTATC TACACCGCAT CCTGGGTCTC 
ACCCATCCCT GGCCGGTAGT GGTAGTAGGA GCAGGTAACC TTGGTACCGC CCTGTGCGCC 
TACCGGGGCT TTCGCGACCG AGGCTTCCAC ATTGTAGGGG TCTTCGATAA CGATCTGCTT 
AAGATAGGTA AGCGTATCCA GGACCTGGAA GTGCTCCCGG TGGAGAAGAT ACCCGAGGTA 
GTAAAAGAGC ACGGGGTGCG CATCGGGATA ATTGCCGTGC CCCAGCAGGC TGTCCAGGAA 
GTGGCCAATA TCCTGGTAAA AAGCGGTGTG GAGGCCCTTT TGACCTTCGG TTCGGTGGCT 
GTGCGAGTGC CCCCACACGT GATAGTGCGT AATATCGACC TCACTATCAA GCTGGAGATT 
CTCACCTTCT ACCTTAACTT CCGGGAAACC CACCCGGCGA CTTGGCTGGA GCCAAACATC 
TAA
 
Protein sequence
MKVLRVPEAT IGRLSVYSRY LEQLDKNGVT TISSGEIAKG VGVSPAQVRK DLAYFGEFGT 
RGVGYNVKDL IRYLHRILGL THPWPVVVVG AGNLGTALCA YRGFRDRGFH IVGVFDNDLL 
KIGKRIQDLE VLPVEKIPEV VKEHGVRIGI IAVPQQAVQE VANILVKSGV EALLTFGSVA 
VRVPPHVIVR NIDLTIKLEI LTFYLNFRET HPATWLEPNI