| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1306 |
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| Symbol | |
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| ID | 8491298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | + |
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| Start bp | 1309679 |
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| End bp | 1311526 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 646359308 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_003239263 |
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| Protein GI | 260893166 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.550913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGAAAC CAAAATCGCT GCGATCAAGG ATCCTCGGGT TACTGGTATT AAGCCTTATA
ACCTACGCCG TGGTGGCTTC CGTAGCCACT TCGGCCATAT TGGTGCGCTG CGCCGAGGAA
GGAGCCCTAA GCAAGGTCAA AGCAGACCTC AACCTGGCCG AAGCCCTTAT AGACTCTCTT
TACCCCGGTC CCTGGGAGAA AAGGGGAGAC AAGCTTTATA AAGGCGATGT CCTGATGAAC
AATAACCCCA TAGTCAACCG GATAACTGCC CTCACCGGCG ATACCTGCAC CATTTTTCTA
GAAGATGTGC GGATAGCCAC CACCGTCCCT GGTCCTTCCG GCAAGCCAGC AGTGGGTACC
AAGCTTTCCC CCGAAGTGGC CCAGGTGGTC CTAAACGAGG GAAAAGACTA CTACGGTCCC
GCCATTGTGG TGGGCAAGCC CTATCAAACC GCCTACCGTC CCTTGCGCAA CTCCAAGGGT
GAGATCGTAG GCATCCTTTA CGTAGGTACT CCTCAGGCGC AGATAAGGAG CATGGTCTAC
CGGCTCCTGG CCAGCAAAGC CCTATTGCTG GTAGGACTTC TGGTAGCTCT GGGCACGATC
ACCACCGTCA CTTTCGCCCG CTGGTTTTCT CCCCTGGAAG AAATCTCTCA AGCCCTGCGA
GCAGTAGCGC GGGAAGACTA CAGCCGGCCC CTTACTCCCA GCCGCTACAC CGAGTTCGAA
GGAATCATAG ATGCGGTAGA GCGCATGCGT CGCGACATCA AGCAAACCTT TAATCGGCTC
AATGACCTTT CCAACTTCGG CATGCGGGCC GCCGCCTTAG TGATGGAACC GGAGGCTATC
GAACTTCTGG TCCATTACCT CAAGAGGCTG GGGGTAGACG AGATAGTGGT GGTTCTTATC
GATGAGAAAA CCGGCAAGGG ACGGCTGGTA GCTACCTACT CCTCCGCTAC CGGCAGAACG
GAGTACTTCG GTGAGCAGTG TTCCTATCCT CCCACGCCGG CCCTTAACGA GGTAAACCTC
TGCTACGTGG TGCGCATCTT GGCTCCTTAC TGCGTCGACG ACGTGAACGA GGAGCTAGAC
TGTCGCTACG CCTGCCACGT GAACCCGGAG GTGAAAAGTT ACGTTTGCTA CCCCATGGCC
GTAGGAGGCC GTACTTTAGG CTGGGTGCGG GTGGGGAGCC GGCAGCCTTA CTTCTTCGAT
GCCGAAACCA AGCGGAGCAT CGAGGGTTAC GTCTCCATCA CCGCCGCCAT GATTGCCAAC
CTGCGCCTAA GTGAACTTAA CCGCCGCCTG TCCCTAATAG ATCCGCTTAC TCAGCTTTAT
AACCGCCGTT TTCTGGAGGA GTACTTAACC CACCAGGTAG TAGAAGCCCA GCGCCTCAAC
CGTCCCTTCA GTATCCTCTT CATTGACGTG GATCAGTTCA AAAACGTCAA CGACTTCTAC
GGCCACGAAG TGGGAGATAT AGCCTTAACT CTACTGGCCC AGACTATCAA GCAGAACCTG
CGCGAAGCCG ATGCAGTGGT GCGTTATGGA GGGGAGGAAT TTATCGCCGT CCTGCCCGGT
ACTGACTTAG AAGGAGCAGC GCAGGCAGCA GAGAAGGTGC GCCGTGCCGT AGCGGAGACC
CCTATATGTT TGGAGTCAGG AGAGAACATC TTCCTCACGG TCAGCATAGG GGTGGCTCAG
TACCGTATCG GTCTAAATCC GGAAGAGGTC ATCCAACGCG CCGATGAGGC CATGTACCAA
GCCAAGATAA AGGGGAAGAA CCTAGTAGTG GCCTACCATG AGGGCGAGAA TAAGTTTGTA
GTAAAAACTC CTAAAAATAC CAACGATGCT CCCCTTTCTC CTCACTAG
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| Protein sequence | MWKPKSLRSR ILGLLVLSLI TYAVVASVAT SAILVRCAEE GALSKVKADL NLAEALIDSL
YPGPWEKRGD KLYKGDVLMN NNPIVNRITA LTGDTCTIFL EDVRIATTVP GPSGKPAVGT
KLSPEVAQVV LNEGKDYYGP AIVVGKPYQT AYRPLRNSKG EIVGILYVGT PQAQIRSMVY
RLLASKALLL VGLLVALGTI TTVTFARWFS PLEEISQALR AVAREDYSRP LTPSRYTEFE
GIIDAVERMR RDIKQTFNRL NDLSNFGMRA AALVMEPEAI ELLVHYLKRL GVDEIVVVLI
DEKTGKGRLV ATYSSATGRT EYFGEQCSYP PTPALNEVNL CYVVRILAPY CVDDVNEELD
CRYACHVNPE VKSYVCYPMA VGGRTLGWVR VGSRQPYFFD AETKRSIEGY VSITAAMIAN
LRLSELNRRL SLIDPLTQLY NRRFLEEYLT HQVVEAQRLN RPFSILFIDV DQFKNVNDFY
GHEVGDIALT LLAQTIKQNL READAVVRYG GEEFIAVLPG TDLEGAAQAA EKVRRAVAET
PICLESGENI FLTVSIGVAQ YRIGLNPEEV IQRADEAMYQ AKIKGKNLVV AYHEGENKFV
VKTPKNTNDA PLSPH
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