| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1292 |
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| Symbol | |
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| ID | 8491284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | - |
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| Start bp | 1297038 |
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| End bp | 1297793 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 646359295 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_003239250 |
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| Protein GI | 260893153 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCAGAAG AACGCCTGCA GAAGGTCCTG GCGCGAGCGG GGATAGCTTC ACGCCGCAAA
GCCGAGGAAC TCATTGTTGC CGGAAGGGTA AAGGTTAACG GTCAAGTGGT AGACAAGCTA
GGGGTTAAAG TGGATCCGGA AAGGGATTCG ATCGAGGTAG ACGGGAAACC TGTTAAGTTG
CCTGAGCGCT TGGTTTATCT AGCCTTTCAT AAGCCGCGGG GTGTGGTCAC TACCCTTCAC
GATCCTCAAG GACGCCCGAA GGTGGCCGAT TTTCTTAAGG GGATAAAGGA AAGGGTTTTC
CCCGTGGGGC GCCTAGATTA CGACAGCGAG GGGCTGCTCC TGCTTACCAA CGACGGGGAG
CTGGCCCACC GCCTCCTGCA CCCGCGCTTT CATGTCCCTA AAACCTATTT AGTGTGGGTG
AAGGGGGAAG TGGGAAAGGA GAAGTTAAAC CTTTTGCGTC GGGGGATAAA GCTGGAAGAC
GGTCCCACCT TGCCTGCCGA GGTGCGAGTT TTGCGGCGTG CGAGGGGGGA GACAGTTTTG
CAGCTGACCA TCAGGGAAGG GCGCAAAAGG CAGATAAGGC GCATGCTTAA GGCTTTGGGC
TGTGAGGTTT TGCGATTGAA GCGGGTGGCG GTAGGGCCGG TGAGGCTGGG TCCCCTGCGC
CCGGGGGAAT ACCGGCATCT TACTCCCCGC GAGGTGGACA GTCTCCGAAA AGCGGCGGGA
CTTGTTGAAG TGACGAAAAA GGAATTCCGT TCTTGA
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| Protein sequence | MPEERLQKVL ARAGIASRRK AEELIVAGRV KVNGQVVDKL GVKVDPERDS IEVDGKPVKL
PERLVYLAFH KPRGVVTTLH DPQGRPKVAD FLKGIKERVF PVGRLDYDSE GLLLLTNDGE
LAHRLLHPRF HVPKTYLVWV KGEVGKEKLN LLRRGIKLED GPTLPAEVRV LRRARGETVL
QLTIREGRKR QIRRMLKALG CEVLRLKRVA VGPVRLGPLR PGEYRHLTPR EVDSLRKAAG
LVEVTKKEFR S
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