| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1276 |
|---|
| Symbol | |
|---|
| ID | 8491268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1282636 |
|---|
| End bp | 1283886 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 646359281 |
|---|
| Product | cation diffusion facilitator family transporter |
|---|
| Protein accession | YP_003239236 |
|---|
| Protein GI | 260893139 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAGCGAC TCTCGGAGGC CCAGCGGATA GCCTTCTTTT CGGTGCTGCT TAACCTGGTG
GTAACAGCGG CCAAAGGTGT CCTAGCCTTT CTCACGGGAA GCACCGCTTT GTGGGCGGAA
ACCCTGCACA GCCTTTCCGA CCTGGCAGCC AGCTCGGCCA CTTGGGTGGG GATCCGCCTG
GCGCGGCTGA AGAGCAAGAC CTTCCCCTGG GGGCTTTACA AGGTAGAAAA CTTGGTCTCC
CTGCTGATTG CCGGGGTGGT CTTCTTTGCC GGCTACGAGA TTTTCCGGGA AGGGGTGCTG
GGGCGACGGC AGGTGGAGCT CACCAACCTT TCGGTGGCCA TCCCGGGACT GGGAGTCATT
ATCGCGGCTA TTTTTCTTTT TTCCTGGTTT GAGAAGCGCA AAGGAGAGGA ATTTAACTCC
CCGGCCTTAA AGGCCGACGC TTTACACCTG CGAGCCGACT CGGTCTCAAC TCTGGTGGTT
CTGGTAAGCC TGCTGGGAGC CTGGATGGGG CATTCCTTTC TAGAAAAAAT AGCCACGATA
GTGGTTATTC TTTTCTTGGT GCGAGCCGGA GGAGAGATAA TGGTGGATGC CTTGCGCGGC
CTGCTCGATG CCTCGGTAGA CCATGCTACT CTGGACAAGA TAAGGGAGAC TATAGCCCGC
GATCCCCGGG TGAGTTCCGT AAAGCAGGTC ATGGCCCGCA ATTCCGGCAG CGTGATCTTC
GTGGTGGCCG AGATAACCCT ACGCTCTTAC AGCCTCAAAG AGGCCCACGC CATATCCGAG
GAGATAGAGG AGGCGGTAAA AGAGGCAGTC CCCGGTATAG AGCGGGTAAC TATCCACTAC
GAGCCGGAGG AAAAGGACTA CTATCTGACT GTGGCCGTGC CTCTGGCCGG CCTGCGGGGG
GAAATTTCGG AGCACTTCGG CAGCGCCCCT TATCTAGCTC TGCTCAAGGT GGACCGCCGC
ACACGGGAGG TAAAAGAACA AATCACCCTT CCCAATCCCT TCCTGCGGGA GGAAAAGGGA
AAGGGAATGA AGCTAGCTCA TTTCCTGATG GAGAGGGGCG TGGACGTGGT TCTCACCCGG
GAGTCCCTGG AGGAGAAAGG GCCCTCTTAT CTTTTTGAGG CCGCCGGCGT CCTTTACTGC
ACCATCACCC ACCGGGACCT GGCGGCGGTT ATAGAAGATC TGGAGGAACT TGTAGGAAGG
GAGGAGGAAC GAGCTGAAGT TCGAGGTACT GGCACAGGAA GGGAAGGCTA G
|
|---|
| Protein sequence | MQRLSEAQRI AFFSVLLNLV VTAAKGVLAF LTGSTALWAE TLHSLSDLAA SSATWVGIRL
ARLKSKTFPW GLYKVENLVS LLIAGVVFFA GYEIFREGVL GRRQVELTNL SVAIPGLGVI
IAAIFLFSWF EKRKGEEFNS PALKADALHL RADSVSTLVV LVSLLGAWMG HSFLEKIATI
VVILFLVRAG GEIMVDALRG LLDASVDHAT LDKIRETIAR DPRVSSVKQV MARNSGSVIF
VVAEITLRSY SLKEAHAISE EIEEAVKEAV PGIERVTIHY EPEEKDYYLT VAVPLAGLRG
EISEHFGSAP YLALLKVDRR TREVKEQITL PNPFLREEKG KGMKLAHFLM ERGVDVVLTR
ESLEEKGPSY LFEAAGVLYC TITHRDLAAV IEDLEELVGR EEERAEVRGT GTGREG
|
|---|
| |