| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1272 |
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| Symbol | secD |
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| ID | 8491264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | - |
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| Start bp | 1279279 |
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| End bp | 1280514 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 646359277 |
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| Product | preprotein translocase subunit SecD |
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| Protein accession | YP_003239232 |
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| Protein GI | 260893135 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGTTGGA ATAAGCTACT TACCTTGTTA GCGGTGGTTA CCGTCGTCGG GGTAGCTATG
TGGTTTGCCT TCCTACCCCC GATAAAAAAC ATTCCCTGGT TGCCCGTAAC TAAGCACGTG
CGCCTGGGGC TTGACCTCCA GGGCGGAGTG CACGTGGTGC TCCAGGCGGT AGATACCCCG
GAGGCTAAGG TCACTCCCCA GGCCATGAAG CAGGTCCTGG CTATTTTGCA GGAGCGGGTC
AACCGCTTCG GCGTCACCGA ACCCATCATC CAACAGCAGG GTGCTCGCCG GGTCATCGTG
GAGCTCCCTG GGGTAAAGGA TCCCGATGAG GTGGTGAACA CCCTAATCCG CACCGCCTTC
CTGGAATTTA AGACCGAAAG TGGAGAAGTG ATCGTCACCG GCCGGGACCT GAAGGAGGCG
CGTGAAGCCA TAGATCCTGC CACCAACCAG CCGGTGGTGA ACCTCACCTT CAACGCCGAA
GGAGCAGAGA AGTTCAAGAA GGCTACCGAA GAGAACCTGG GGCGGCCCAT AGGGATCTAC
CTCGATGGTA AGCTCATCCA GAACCCCGTC GTGAAGTCGG TTATACCGGA CGGGAAGGCG
CAGATCACTG GCTACCGCTC GCTGGAGGAG GCCCACCGGG TGGCGGTGCT CCTGCAGTCG
GGCGCCTTGC CGGTGAAGCT GGAGATCCTG GAGAAGCGCA CGGTGGGGCC CACGCTAGGG
GCGGATTCGC TGCACAAGTC GCTTTTCGCC GGGGCCATCG GCGTGGCTGC CATCCTCATC
TTCATGCTCC TCTATTACCG GGTGCCGGGA CTCATCGCCG ACTTCTGCCT GGGCATTTAC
GCCCTGCTGG TGCTCCTGGT CTTCGTCGCC CTCAAGGCCA CTATGACCCT TCCTGGCATT
GCTGGGTATC TCCTGAGCTT TGGTGTGGCG GTGGACGCCA ACATCTTGAT CTCGGAGCGC
ATAAAGGAGG AGCTGCGTAG CGGCAAAAGT CTGCGGACTG CCGTCGATCA CGGATTTAAG
TACGCCTTCC GGGCCATCTT CGACGCCAAC GTCACCACCG TTCTGGGTGC CCTGGTTCTC
TACTACTTCG GCACCGGTCC CATCCGAGGT TTCGCCTTGA CCCTGGCAGT GGGCGTCATC
GCCAGCTTCC TAACGGCGGT CACCATGACG CGCTGGCTCC TGCGCCTGGT CCTGGATACG
GGGCTCATCA AAAACCCCAA GCTTTACGGA GCTTAA
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| Protein sequence | MRWNKLLTLL AVVTVVGVAM WFAFLPPIKN IPWLPVTKHV RLGLDLQGGV HVVLQAVDTP
EAKVTPQAMK QVLAILQERV NRFGVTEPII QQQGARRVIV ELPGVKDPDE VVNTLIRTAF
LEFKTESGEV IVTGRDLKEA REAIDPATNQ PVVNLTFNAE GAEKFKKATE ENLGRPIGIY
LDGKLIQNPV VKSVIPDGKA QITGYRSLEE AHRVAVLLQS GALPVKLEIL EKRTVGPTLG
ADSLHKSLFA GAIGVAAILI FMLLYYRVPG LIADFCLGIY ALLVLLVFVA LKATMTLPGI
AGYLLSFGVA VDANILISER IKEELRSGKS LRTAVDHGFK YAFRAIFDAN VTTVLGALVL
YYFGTGPIRG FALTLAVGVI ASFLTAVTMT RWLLRLVLDT GLIKNPKLYG A
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