| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1268 |
|---|
| Symbol | |
|---|
| ID | 8491260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1275564 |
|---|
| End bp | 1276691 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 646359273 |
|---|
| Product | geranylgeranyl reductase |
|---|
| Protein accession | YP_003239228 |
|---|
| Protein GI | 260893131 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
|---|
| TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAGAGTT CCTGGCCGGT TATCGTGGTG GGTGCAGGGC CGGCCGGAGC TCTGTGCGCT
TGCAGCTTAG CGCGGGCCGG CCTTTCGGTC CTGCTCTTGG AAAAAACTCA TTTTCCTCGG
GAAAAGCCTT GCGGTGGAGG ACTTACTCCC AAGGCAGCAG CTCTCCTTCC TTTTTCTTTT
CAATCGGTGG TAGAGGGGGA AGTGAAAAGG GCGATCCTGT GCCTTCCCGG CGTGGAAGCC
TTAGAGATCA ACTGGGATCG ACCGGTCTGC TTCCTGGTGC GCCGGGAGAT CCTGGACACT
CACCTGGCTG AACAGGCCCG CCAAGCGGGA GCCTTCTTGC GGGAAGGCGA GGAGGTGGTG
CGAATTGAGG AGACCGGGGA AGCGGTGACC GTCACCACTG CCGGCGGGGC CAGTTACCGG
GCGCAGCTAG TGATAGGGGC AGACGGGGCA TTAAGCCGAG TGGCGCGGCT AGTCGGCCGC
CCTTATCCCC GGCATTTTGC CTTGGCCGCA GCTCTCATAC CTCCACCGGC CTGGGCCGAG
AAAAGAGATA CCATTCTCAT AGACCTGGAA GCGCTGCCCT ACGGCTACGG CTGGGTTTTC
CCCAAAATCG ACCATCTCAA CGCGGGCGTG GGCTCTTTTG CCGCCACTCG CGAGCTGCGC
TTTTACTGGG AAAACTTTCT CCGGCGCAAC GGGTTGGCTC GGCCTTTCCG GCTGCGGGCC
CACCCTCTGG CCCTGGCCGG AAAAGAGACG GAGTTGGGGC GGGGGCGGGT GATGCTTTTA
GGGGACGCAG CGGGCTTGGT TGATCCCCTG ACCGGTGAAG GGCTTTACGC CGCCTTTCGC
AGTGCCGAGT TGGCGGCCAG GGCCATACTG GAGAAAGGGG TGGGAGAGCG GGCCGTTTCT
CGGTATCGCG AGCTGGTAAA GGCCTCTCTT TTGCGCGAGT ACCACTTCGC CTACCGCTTG
GCTCGGCTTT TCTATCGCTT CCTTCCTCTC ATTGCCCGTT ACTTCTCCTC CCGGCCCGAG
AAGATCCGCT ACTTCTGGGA GTTTCTCTTC TTCGGCGGGT ACGCTGAGCT CTTCCGCCGA
GTAGGAGCCC GCTACTGGGA AAAGCTTTTG TGTGGCTATT TGAACTAG
|
|---|
| Protein sequence | MKSSWPVIVV GAGPAGALCA CSLARAGLSV LLLEKTHFPR EKPCGGGLTP KAAALLPFSF
QSVVEGEVKR AILCLPGVEA LEINWDRPVC FLVRREILDT HLAEQARQAG AFLREGEEVV
RIEETGEAVT VTTAGGASYR AQLVIGADGA LSRVARLVGR PYPRHFALAA ALIPPPAWAE
KRDTILIDLE ALPYGYGWVF PKIDHLNAGV GSFAATRELR FYWENFLRRN GLARPFRLRA
HPLALAGKET ELGRGRVMLL GDAAGLVDPL TGEGLYAAFR SAELAARAIL EKGVGERAVS
RYRELVKASL LREYHFAYRL ARLFYRFLPL IARYFSSRPE KIRYFWEFLF FGGYAELFRR
VGARYWEKLL CGYLN
|
|---|
| |