Gene Adeg_1259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeg_1259 
Symbol 
ID8491251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAmmonifex degensii KC4 
KingdomBacteria 
Replicon accessionNC_013385 
Strand
Start bp1268344 
End bp1269270 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content60% 
IMG OID646359264 
Productporphobilinogen deaminase 
Protein accessionYP_003239219 
Protein GI260893122 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0181] Porphobilinogen deaminase 
TIGRFAM ID[TIGR00212] porphobilinogen deaminase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.925729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGAAAA GCAAGCGTTG CCTGCGCATT GGCACCCGGG GGAGCGATTT GGCCCTGGCC 
CAGACGGAGC AAGTTTTGCA GATCCTCCGG GAAAGATGGC CGCATTATAC ATACGAAATA
GTTAAAATTA AAACTACCGG CGATAAGGTA CGAAACTTAG CCCTTCCCCG CATAGGGGGG
AAGGGGCTTT TTACCAAGGA GCTGGAAGTA GCCCTGCTGG AAGAAAAAAT AGACCTGGCG
GTGCACAGCC TCAAAGACCT CCCCACCGAG CTGCCGGAGG AACTCTGTGT AGGGGCTGTG
CTTCCTCGTG AGCATCCGGG GGATGTGCTC ATATCCCTGA CGGGGGCAGG GCTGGAGGAC
CTGCCGGAAG GGGCCAGGAT AGGTACCTCC AGCCTAAGGC GGCAGGCCCA GCTGAAAGCG
GCCCGTCCAG ATCTAAACTT TGTACCCCTG AGGGGGAACG TGCCCACCCG CCTGCGCAAG
CTGGAAAAGG GAGAGTGCGA GGCAGTGGTG CTGGCCTGGG CCGGGCTTAG AAGGCTCAGG
CTCGATCTTA CCGGAAGAAT GACACTTCTT CCTTACCAGG TCTGCCTTCC GGCAGTAGCG
CAGGGGGCCA TAGGGGTGGA AATGAGAAAA GAAGACCGGG AGCTCAGAAA GATGGTAGAG
GTGCTGGATG ATCCGACCAC GCGCCTGGAA GTGACCGCCG AACGGGCCTT TTTACGCTGG
CTGGGAGGGG GGTGTCACGT ACCCATAGCT GCCCTGGCGC GGGTGGCAGG AGCCGAGATC
TTGCTGGAGG GGCTGGTGGC CGATCCGGAA GGAAAGAGGA TTGTCCGGGG GCAAGAAAGC
GGCTCCACTG CCTATCCGGA AGAAGTGGGG ATAAGACTGG CCGAACGGCT CCTCCGGGAA
GGCGCCGAAG AGTTGCTGCG AGGATAA
 
Protein sequence
MRKSKRCLRI GTRGSDLALA QTEQVLQILR ERWPHYTYEI VKIKTTGDKV RNLALPRIGG 
KGLFTKELEV ALLEEKIDLA VHSLKDLPTE LPEELCVGAV LPREHPGDVL ISLTGAGLED
LPEGARIGTS SLRRQAQLKA ARPDLNFVPL RGNVPTRLRK LEKGECEAVV LAWAGLRRLR
LDLTGRMTLL PYQVCLPAVA QGAIGVEMRK EDRELRKMVE VLDDPTTRLE VTAERAFLRW
LGGGCHVPIA ALARVAGAEI LLEGLVADPE GKRIVRGQES GSTAYPEEVG IRLAERLLRE
GAEELLRG