Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeg_1204 |
Symbol | |
ID | 8491195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ammonifex degensii KC4 |
Kingdom | Bacteria |
Replicon accession | NC_013385 |
Strand | - |
Start bp | 1221850 |
End bp | 1222482 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 646359209 |
Product | phage SPO1 DNA polymerase-related protein |
Protein accession | YP_003239165 |
Protein GI | 260893068 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1573] Uracil-DNA glycosylase |
TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0469279 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTAGGG CGACTAGATC GGCTTCGGGT AGTTTGCAAC TGACTTTCGA CGATCTGGCG GTGCCGCAGA CACTAGAGGA ACTGGAGGCG GTGGTAAAAA ATTGTCGCAA GTGCCCGCTG GCGGCGGGCC GGACTAACGT GGTTTTTGGT GAGGGAAACC CGCACGCCCT ACTTATGTTC ATCGGTGAGG GTCCCGGGGC TGAAGAGGAC CGGCAGGGGA GGCCCTTTGT CGGACCGGCG GGGCAGCTGC TCGACCGCAT CCTGGCTGCC TGCGGGATAA AGCGGGAGGA GGTCTACATA GCCAACATTG TAAAGTGCCG TCCTCCGGGA AACCGGGTAC CCACCAAGGA GGAGGCAGAA GCCTGCCTGC CCTACCTGCG GCGGCAGATC GAACTCATCC GGCCCAAGAT AATTGTCTTG CTGGGAGCGA CTGCCCTGCA GTACCTGGTG GGGTCGGGGG CCCGGATTAC CAAAATACGC GGGCAGTGGC TGGGACCCCT TTACGGAGCC CAGATCATGC CCACTTATCA TCCAGCAGCT TTGCTGCGCG ACGCCAGCAA GAAACGCCCG GCCTGGGAAG ATTTCAAAAA GGTCAGAGAC GCTTACTTTG GCCTTAAAAG ACAAGGGCTC TAA
|
Protein sequence | MARATRSASG SLQLTFDDLA VPQTLEELEA VVKNCRKCPL AAGRTNVVFG EGNPHALLMF IGEGPGAEED RQGRPFVGPA GQLLDRILAA CGIKREEVYI ANIVKCRPPG NRVPTKEEAE ACLPYLRRQI ELIRPKIIVL LGATALQYLV GSGARITKIR GQWLGPLYGA QIMPTYHPAA LLRDASKKRP AWEDFKKVRD AYFGLKRQGL
|
| |