| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1202 |
|---|
| Symbol | |
|---|
| ID | 8491193 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1220657 |
|---|
| End bp | 1221469 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 646359207 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_003239163 |
|---|
| Protein GI | 260893066 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0510958 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTAGCCT TACCAGAGAA GAGCATCTTA CTGGTAGATG ACTCGACTCT TACCAGGTTT
TCCTCCAAGA GGGTACTGGA GGAAAAGGGC TACCTGGTAG ACGAAGCTGC CAGCGGCCAG
GAGGCGCTGG TTAAGGCTAG GGAAAAAGGA GAACCGTACG ACCTGGTGAT CCTCGACATT
CACCTCCCGG GAATGGACGG CCTAGCTGTA CTAGAAAACC TTAAACGTCT ACCGGAGTAC
CGGTACGTGC CGGTCATGGT AGTGTCGGTC GAGAGTAGCG TCTCAGTAGT CAAGCGGGCT
ATAGAACTGG GAGCCGTGGA GTACCTCTGC AAGCCCTTCT CGATAGAAGA GCTGGTGCGC
CGCGTAGAAA AACTGATAGG CCCGGGTGCC AAGGAAGAGA TTACTCCTGC AGAGTTGCTC
CAAAAAGTAC TCAGAAACGA GATCAACCGG GCGAGGAGGG GCGGGCTGAA GGTAGCCTTG
GTTCTGGCCA GGTCTGAAGG GCTGGGCAAG GGAAAGATAG TGGAATGCGC CAGGCAGGTG
CGGCGGCGCT TGCGCGAAAT AGACACGGTC ATAGAGCTCA GCAGGAGCAC ACTGGCGCTG
GTTCTTCCCC TTACGGGGAG AGAAGGCGCA CAGGTGGTAA TAACGAAGCT GGCGGGGTTG
TTGCCTGGGA CCTGGAGTTA CGGGATTGCA GTATACCCTG ACAATGGCAA AGACGGGGAG
GAGCTTTTCG CCTACGCCGA AGCTTCTTTA AAGGAGAGTT GGGAGAAGAA AAACCCCGAA
GTGCCAGTCC GGCAGCAACC CTCCGACACT TAA
|
|---|
| Protein sequence | MLALPEKSIL LVDDSTLTRF SSKRVLEEKG YLVDEAASGQ EALVKAREKG EPYDLVILDI
HLPGMDGLAV LENLKRLPEY RYVPVMVVSV ESSVSVVKRA IELGAVEYLC KPFSIEELVR
RVEKLIGPGA KEEITPAELL QKVLRNEINR ARRGGLKVAL VLARSEGLGK GKIVECARQV
RRRLREIDTV IELSRSTLAL VLPLTGREGA QVVITKLAGL LPGTWSYGIA VYPDNGKDGE
ELFAYAEASL KESWEKKNPE VPVRQQPSDT
|
|---|
| |