Gene Adeg_1190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeg_1190 
Symbol 
ID8491180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAmmonifex degensii KC4 
KingdomBacteria 
Replicon accessionNC_013385 
Strand+ 
Start bp1205502 
End bp1206152 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content59% 
IMG OID646359195 
ProductDNA binding domain protein, excisionase family 
Protein accessionYP_003239152 
Protein GI260893055 
COG category[L] Replication, recombination and repair 
COG ID[COG2452] Predicted site-specific integrase-resolvase 
TIGRFAM ID[TIGR01764] DNA binding domain, excisionase family 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAGGT ACCATAAGAA GCGCATGTAC CGGATTGCCG AAGCGGCAGT CCTGCTCGGC 
GTTCACAAGG ACACCCTGCG CCGCTGGGAA AGGGAAGGAA AGATCAAAGC CGTCTGGCTC 
GGGCGAGAGC GCCGCTTCCC CGAAGAAGAG ATCCGCCGCC TCTTAGGAGA AGCCAACCCC 
GACACGGTAG TGCTTTACGC CCGGGTATCG GGCCACGCGA GACGAGCGGA CCTCCAGCGA 
CAGGTAGAGG TATTGAGAGA AGCGTACGGC CCCAAATTCT CTAACGTGGT GGTCCTGACC 
GACGTCGGTT CCGGCCTCTC GACTTCCCGC AGGGGTTTGA GGAAGGCCAT GGAACTGGCC 
CGGGAGAGAA AGATACGTGC CGTCGCCGTC ACCTGTCCCG ACAGGCTGAC GCGCTTCGGC 
TTCGAGTACC TGGAAGAGTA CTTCTCGAGC TTCGGCGTCG AAGTCCTCGT GCTCAACCGG 
GAAGAAGACA AAAGCTCGCA GCAGGAACTG GTAGAAGACT TGCTCACTAT AGTCACCTCT 
TTCGCGGGCA AGCTCTACGG GCACAGGTCG CACAAGGTGA AAAAGCTCAA GAATGAGGTG 
AAGGAGGCAC TCTCCCGCCT TGATACTGAC GACCAGCTTG AGACTCCCTG A
 
Protein sequence
MPRYHKKRMY RIAEAAVLLG VHKDTLRRWE REGKIKAVWL GRERRFPEEE IRRLLGEANP 
DTVVLYARVS GHARRADLQR QVEVLREAYG PKFSNVVVLT DVGSGLSTSR RGLRKAMELA 
RERKIRAVAV TCPDRLTRFG FEYLEEYFSS FGVEVLVLNR EEDKSSQQEL VEDLLTIVTS 
FAGKLYGHRS HKVKKLKNEV KEALSRLDTD DQLETP