Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeg_1174 |
Symbol | |
ID | 8491162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ammonifex degensii KC4 |
Kingdom | Bacteria |
Replicon accession | NC_013385 |
Strand | - |
Start bp | 1190657 |
End bp | 1191316 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 646359179 |
Product | DNA binding domain protein, excisionase family |
Protein accession | YP_003239138 |
Protein GI | 260893041 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2452] Predicted site-specific integrase-resolvase |
TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.122691 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGAAGC TTTACCCGCT CCACGAAGCG TGCAGGATCT TAGGGGTGTC TCTAAAGACA CTCCAGCGGT GGGACAAGGC GGGTAAGATC AGGGTGGTCA GGACGCCCGG GGGAAGAAGA AGAGTTCCCG AATCGGAGGT GAAGAGGTTA CTCGGGGTAG AGAAACCGCC TGTGCCCCAG GAGCGCGTGC TGGCCATCTA CGCCCGTGTC TCCTCGCACG AACAGAAGGC CAAGGGCGAC CTGGACAGGC AGGTCGAATC GGTCAGGAAA AGGTTCGACC CGAGGCTGTT TGACGACATT CTGGTGGTTA CCGGCGTTTC CTCGGGCTTA AACGACAGAC GGAAGGGCCT CATGAGGCTG ATGACACTGG CCAGGGAGGG AAAGATTACC GACCTGGCAG TAAGCTACAA GGACAGGCTC ACCCGCTTCG GCTTCAACTA CCTGAAGGCA TACTTTGAGA GCTACGGTGT GAAGATCCAC GTGGTGAATG GGGAAGAAGA CCGCAAGACG GCACACGAAG AACTGGTGGA GGACCTGCTG GCCATAGTCA CTTCGTTCGC CGGTAGGCTT TACGGTGCCA GGAGCAGGAG GAAGGAGGGA GTCGTGAGGC AGGTAAGGGA GGTGTTTGAG GCTGCTGGCC ACGTACCAGG CGCGGATTGA
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Protein sequence | MEKLYPLHEA CRILGVSLKT LQRWDKAGKI RVVRTPGGRR RVPESEVKRL LGVEKPPVPQ ERVLAIYARV SSHEQKAKGD LDRQVESVRK RFDPRLFDDI LVVTGVSSGL NDRRKGLMRL MTLAREGKIT DLAVSYKDRL TRFGFNYLKA YFESYGVKIH VVNGEEDRKT AHEELVEDLL AIVTSFAGRL YGARSRRKEG VVRQVREVFE AAGHVPGAD
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