| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1163 |
|---|
| Symbol | |
|---|
| ID | 8491151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1179863 |
|---|
| End bp | 1181266 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 646359171 |
|---|
| Product | protein of unknown function UPF0236 |
|---|
| Protein accession | YP_003239130 |
|---|
| Protein GI | 260893033 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00489953 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATTA TAAAACAGAT TTGGGAGAAG TTCCAGAGGG TAGCGGAGCT AACGTTTGAG
GTATTAGAGA ACGGGATTGA TTTTATAAGC TTTCAGGAGA GGCTCCGGCG GGAACTCGAC
AGCTTAGGGC AAGAGATCCT GAGGGAAGTT CTGGAGGCAA AAGACGCTTA TTTACGGGAG
CACCGGGAAA AGCGGCCTGG CTGGGAAGTT GTGCGGAGGA ATGATCCCAA GGAAGTGCTC
ACCCTTTTCG GTCTGGTCAG CTACAAGCGG ACCTATTACC GGCATAAAGA GACTGGGGAG
CGGGCGTACT TAATAGACCG GTTGGTAGGT TACGGGCCGC ACGCGCGGGT TGATCCTCTG
GTTAAAGCAC AAGCCTTAGA AGAAGCGGTA GAGCTTTCCT ATCGGAAGAG TGGCGAGAGG
GTAGGGAGAG GCAATCGGGA GGTTGTGCTA AGTGGCGAAG CGGTGAAGAG GGTGATTCAC
AACTTTACAC CGGAAGAACT GCCCGAACCA CCCAAAGAGA AGCGCCGGGT AAAGGTTCTT
TATGTAGAGG CGGATGAAGA CCACGTAGCA GGTCAGGACA GAAAGAAGTA CTTACCCCGG
CTGGTATACA TCCACGAGGG GAAAGAGAAG GTGGGGAAAG ACAGATACAG ACTCAAGCGG
CCTTATTACT TGGGAGGGCT TTACTCAGAT ACGGATGAGC TGTGGTTCGA GGTGTTGAGC
TACATCGAGG AGCAGTACGA ATTATCTTCT GTGGAGCAGA TTTATCTCTG CGGTGACGGA
GACAGGTGGA TAAAGAAAGG GCTGGAGTTT CTACCGAGGA GCGTTTTTGT CTTAGATCTT
TTTCACCTGG ACAAGTACCT GGTGGCTGCT TTGGGGCGTG ATAGTGATGG TTATAGAGAG
ATTTGGGCGG CCTTATGGGA TGGTGATGAG GTAAAGGTAC AGGCGATTTT GCGGCGGGCA
GGCAAAGCTG CGGCGAGTCC TGCACGGAAG GAAGCGGTAC GGGATTGCCG ACGTTACATC
CGGCAGAACT GGGAGGGGAT AACGGCATAC CGGCTTTACC CGGAGGCGCA GTTAGGGGTG
AGCGCGGAGG CGCACGTAAG TCATCTCTTC TCGGCACGGT TATCATCCCG ACCGATGGCT
TGGAGTGCTT GTGGGGTAGA CCGGATGGCC CGGTTGCGGG TGGCGAAGGC GAATGGTGTT
TCCTTGCGGG AGCAATATGT AGCCCGATGG AGGGAGGGCT TAAAGGCTTT AGAGATCGAT
AAGGCAGCCA TTGAGGAAGA GAGGCAGAGG CTAAGGAAAG TATCGGGTGA GGTGTTCGAT
AATCTTCCCG CTCTACGGGG TCCGGTAACA TCATTAACCA GAGCCCTCAA AGCTTTGAGC
CGGAACATCG ATCTTCTTTG GTAG
|
|---|
| Protein sequence | MQIIKQIWEK FQRVAELTFE VLENGIDFIS FQERLRRELD SLGQEILREV LEAKDAYLRE
HREKRPGWEV VRRNDPKEVL TLFGLVSYKR TYYRHKETGE RAYLIDRLVG YGPHARVDPL
VKAQALEEAV ELSYRKSGER VGRGNREVVL SGEAVKRVIH NFTPEELPEP PKEKRRVKVL
YVEADEDHVA GQDRKKYLPR LVYIHEGKEK VGKDRYRLKR PYYLGGLYSD TDELWFEVLS
YIEEQYELSS VEQIYLCGDG DRWIKKGLEF LPRSVFVLDL FHLDKYLVAA LGRDSDGYRE
IWAALWDGDE VKVQAILRRA GKAAASPARK EAVRDCRRYI RQNWEGITAY RLYPEAQLGV
SAEAHVSHLF SARLSSRPMA WSACGVDRMA RLRVAKANGV SLREQYVARW REGLKALEID
KAAIEEERQR LRKVSGEVFD NLPALRGPVT SLTRALKALS RNIDLLW
|
|---|
| |