| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1151 |
|---|
| Symbol | |
|---|
| ID | 8491139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1168192 |
|---|
| End bp | 1169874 |
|---|
| Gene Length | 1683 bp |
|---|
| Protein Length | 560 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 646359160 |
|---|
| Product | transposase, IS605 OrfB family |
|---|
| Protein accession | YP_003239119 |
|---|
| Protein GI | 260893022 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01765] transposase, putative, N-terminal domain
[TIGR01766] transposase, IS605 OrfB family, central region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGAGAA AGCACAAAAG GAAGAAGTTT AGTATTACAG TCTGCGGGGA GTTCTTCCCC
GAAGTCTACC CCGCCTTCAG GTCGGCGAGG TGGGCCCGGG GCGAGGAAGA CCCACTGGAG
ACGGAGATGC GGCTCTTCTG CGCCTGCGAA CGGTGGGCCT ACAACCGGCT CTTAGAAGGT
GTCTCCCGGG ACGAGATCAA GAAGCGCGGC CAGGAGCTTT TCGGGCTCAA CTCCCGGTAC
GTGGACGACG CCAGGCTTAG AGCCCAGGCC CTGCTGGACT CCCAGAAAGA GCTCCTGGCA
CAGGAAGTAG AGGAGACGGA AAAGAAGCTG AACCGGGCCA GGAAGAAGCT GGGCTTAGCC
ATGAAGAAAC TGGCCAGGGC CGAAAAGAAG GGCGCCGCCC CTGCCGCGCT GGAAAAGCTG
CGCCTGGCAG TTAAAGGCCG CGCTTCACGT GTAGCCTCCC TGGAGGAGAG ACTGGCCGAA
CTCAACTCCC ACTTGGAAAA CGGCACCGTA CCCAGAATGG TCTTCGGGGG TAGGAAGCTC
TGGAAGAGGG TTTGCAAAGG CCGGGCCACG CGGGAGGAGT GGTGGCACGC CCGCAAAAAC
CGCCTCTACT CCCGTGGGGA CGAAGAGAAA GGCGGCAACC CGAACATCAA AGTCTTCCAC
CGGTACGGGG GGTTCTACCT GTCGGCGACC ATCTCCCACC TCTCGGAGAA GGTGGGTGAG
GACAGGCTTG GCCGCCCGAA GGTGAGCCGC GCCCCGAGGG TGGAGGGCAG GCTCTGGCTG
CCAGAGAAGC ACCGGGACTT GGTCAGGATA TGGCTGGCCA TGAAGCTGCC CTACACGGCG
GAACTGATAC GCACTCCGGA CGGACGGTAC CTGGTCCACC TGACGTTTGA CCTGGGCGAG
CTCAAGGAGC CTGACTTCGT GAGGGGCTGC CTTGCCCTGG ACACAAACCC CGACGGCGTA
GCTTTATGCA GCGTCGGTCC CAACGGCCAG CCGGAGCCGT GGCCGGAAGG CTTCAGCGTC
CCCTACCCGG GCAACCTGGG CAAGTACGAA GGGGAGTTCC AGGTCATCAC CTACCCCAAC
GGTTTTCTCT ACATTAAGGC GCCCGACCTG ACCTACGCTT CCGGCTTCCG GCGGGACTAC
CTGATAGGCG TGCTGGCTAA AGTGGTGGTA GACATAGCCC TCTTTCTGGG CAAACCCGTG
GTCCTGGAGG ACTTAGACTT CGGCAAGGAC CGGCTGGGTA CCAGCAAAGA GTTTAACCGC
ATGGCTTCCA ACTTCCCCTA CGCGAAGATG GTGGAGGCGG TGTGCCGGAG GGCGGCCAAG
GAAGGTGTGC CCTTTAAGCT GGTACCGCCG CGGCACACCT CCACCATCGG GTACTGGAAG
TACGCGGGGC GGTACGCGGT CCCGGTGCAC TGCGCGGCGG CACTGGTGAT CGGCCGCCGG
GCCATGGGCT TCAAGGAGAG GATCACGCGG GAAATTAAGG AGTTCGTACT CCGGGTCAAA
GAGGAGCTCG CTTCCGGTGA TTCCTTGCCT GGGGAAGGAA GAGGGATGAC CCGGAAGGTC
AGGGCCCTGC TTGCCCGGCT GGAAAAGAAG CTCCCCCTGC ACAACGGGCT TGCCCGCCGG
CGGCAGGAAA GCTTCAGTTC CTGCTGGCGC GAGCTTAAAA TGCTGGCTTT GGCTTTCCGG
TGA
|
|---|
| Protein sequence | MRRKHKRKKF SITVCGEFFP EVYPAFRSAR WARGEEDPLE TEMRLFCACE RWAYNRLLEG
VSRDEIKKRG QELFGLNSRY VDDARLRAQA LLDSQKELLA QEVEETEKKL NRARKKLGLA
MKKLARAEKK GAAPAALEKL RLAVKGRASR VASLEERLAE LNSHLENGTV PRMVFGGRKL
WKRVCKGRAT REEWWHARKN RLYSRGDEEK GGNPNIKVFH RYGGFYLSAT ISHLSEKVGE
DRLGRPKVSR APRVEGRLWL PEKHRDLVRI WLAMKLPYTA ELIRTPDGRY LVHLTFDLGE
LKEPDFVRGC LALDTNPDGV ALCSVGPNGQ PEPWPEGFSV PYPGNLGKYE GEFQVITYPN
GFLYIKAPDL TYASGFRRDY LIGVLAKVVV DIALFLGKPV VLEDLDFGKD RLGTSKEFNR
MASNFPYAKM VEAVCRRAAK EGVPFKLVPP RHTSTIGYWK YAGRYAVPVH CAAALVIGRR
AMGFKERITR EIKEFVLRVK EELASGDSLP GEGRGMTRKV RALLARLEKK LPLHNGLARR
RQESFSSCWR ELKMLALAFR
|
|---|
| |