| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1096 |
|---|
| Symbol | |
|---|
| ID | 8491084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 1109693 |
|---|
| End bp | 1111162 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 646359113 |
|---|
| Product | glutamyl-tRNA(Gln) amidotransferase, A subunit |
|---|
| Protein accession | YP_003239072 |
|---|
| Protein GI | 260892975 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGGGACA TATGCTTTCT GCCGGCTCAC ATTCTGCGTG AGCGCTTCTG CCGCAAGGAG
ATTTCGGCCA AAGAAATAGT TACTGCTTTC TTGGAGCGGA TAAAGCAGGT GGAGCCCAAG
GTCAAGGCTT TCCTAACCCT TTGCGAGGAG GAAGCTTTGA ACCAGGCCGA GCAACTCGAC
CGAGCCTTGG CTTATGGGGA AGAAATGGGG CCCCTGGCAG GAGTGCCGGT GGCCCTGAAG
GACAACCTCT GTCTTTCCGG TTTTCCCACT ACCTGCGCCT CCAAGATCCT GGCCAACTTT
TACCCTCCTT ACGACGCTAC GGTGGTCAGG CGGCTCAAAG AGGCAGGGGC CATCATCGTG
GGTAAGACCA ACCTGGACGA GTTCGCCATG GGCTCTTCTA CGGAAAACTC AGCCTTTCAT
CCCACCGCCA ATCCCTGGGA CCTTTCCCGC GTGCCGGGAG GTTCAAGTGG CGGGTCGGCG
GCGGCCGTAG CAGCTGGAGA AGTTCCGGTG GCGCTGGGAT CGGACACTGG GGGCTCTATT
CGCCAACCGG CCGCCTTCTG CGGCGTGGTG GGGCTCAAGC CTACGTACGG CCGGGTGTCC
CGCTATGGGT TGGTGGCCTT TGCTTCTTCG CTTGACCAGA TAGGCCCTAT TACCCGGTGC
GTTGAGGACT GCGCTTTGGT CCTTCAAGTC ATTGCCGGGC ATGATCCCCG CGATGCCACC
TCCATCCCGG GCGAAGTACC GGATTATCGG TCAAGCCTTA TTTCAGATCT CAAGGGGATG
AAGGTAGGGA TTCCCCGTGA ATATCTGGGG GAAGGTATTG CACCGGAAGT CAGGGCGGTG
GTAGAGGAGG TAGCGGCCAA ACTGGCGGAC CTGGGAGCCC AGGTAGACTA CACTTCCCTT
CCCCACACCA AGTATGCCCT GCCCGCTTAC TATCTGGTGG CCCCCGCCGA GGCTTCTTCC
AACTTAGCCC GTTACGACGG GGTGCGCTAT GGCCTGCGGG TTCCGGCAAA AGAGGCCAAG
GACTCCATGG CGCTTACCCG CAAGGAGGGT TTTGGTCCAG AGGTCAAGCG GCGCATCATG
CTGGGAACCT ACGCCCTCTC GGCGGGCTAC TACGAAGCCT ACTACCTGAA GGCGCTCAAA
GTACGGACTC TCATCAAGCG CGACTTCGAC GAAGCTTTTG CCCACTTCGA TTGCCTCCTT
ACCCCGACCA CTCCTACGCC GGCTTTCCGG ATGGGAGAGA AGCTTGCTGA TCCCTTAACC
ATGTACTTTT CCGATATATG CACCTTGGCT GTTAACCTGG CGGGCCTGCC AGCTATCTCG
GTGCCGGCGG GGAAAGTTGG TCATTTACCG GTAGGGGTAC AGTTCATCGC TCCGCCCCTG
AAGGAGGACA AGCTCTTCCG GGTAGCCTAT GCTCTGGAAC AGGTGGTGGG CTTTCCTTCC
TGGCGCCCCC CGCTGGAGGT GAAAGAGTGA
|
|---|
| Protein sequence | MGDICFLPAH ILRERFCRKE ISAKEIVTAF LERIKQVEPK VKAFLTLCEE EALNQAEQLD
RALAYGEEMG PLAGVPVALK DNLCLSGFPT TCASKILANF YPPYDATVVR RLKEAGAIIV
GKTNLDEFAM GSSTENSAFH PTANPWDLSR VPGGSSGGSA AAVAAGEVPV ALGSDTGGSI
RQPAAFCGVV GLKPTYGRVS RYGLVAFASS LDQIGPITRC VEDCALVLQV IAGHDPRDAT
SIPGEVPDYR SSLISDLKGM KVGIPREYLG EGIAPEVRAV VEEVAAKLAD LGAQVDYTSL
PHTKYALPAY YLVAPAEASS NLARYDGVRY GLRVPAKEAK DSMALTRKEG FGPEVKRRIM
LGTYALSAGY YEAYYLKALK VRTLIKRDFD EAFAHFDCLL TPTTPTPAFR MGEKLADPLT
MYFSDICTLA VNLAGLPAIS VPAGKVGHLP VGVQFIAPPL KEDKLFRVAY ALEQVVGFPS
WRPPLEVKE
|
|---|
| |