| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1094 |
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| Symbol | |
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| ID | 8491082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | + |
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| Start bp | 1107309 |
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| End bp | 1109327 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 646359111 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_003239070 |
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| Protein GI | 260892973 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.878392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCGCC GGCTTTCCAA GGAAGAGGCC AAGCGGCGCA TAGAGGAGCT GCGGCGGGAA
ATAGCCTACC ACGACTACCG CTATTATGTG CTTGACTCTC CGGTGATCTC CGATGCCGAG
TACGACCGCC TAGTACTGGA GCTTATGGCT CTAGAAGAAG CCTTTCCCGA GTTCATCACC
CCTAACTCTC CCACCCAGCG GGTAGGAGGG GCGCCCCGCG AGGGCTTCCC CACGGTGCGC
CACCTGGTAC CCATGCTGAG CCTGGCCAAT GCCTTTGAGC CCGAAGACCT GCGCGACTTC
GACCGACGGG TGAGAGAAGC CTTGCCAGGC GAAAAGGTGG AGTACGTGGT GGAGCCCAAG
ATCGACGGGC TGGCCGTCTC CCTCCTTTAC CGTGACGGCG AGTTTGTTCA AGGGGCCACC
CGCGGGGACG GGGAAGTAGG GGAAGACGTT ACACCCAACT TGCGCACCAT CCGGAGCATA
CCCTTGCGCT TTCTTAAGGA CGCCCCTCCC CTCATCGAGG TGCGGGGAGA GGCCTTCATG
CCCAAAGAAG CCTTTGTCAA GCTCAACGAG CGGCGGGAAG AGGCGGGAGA ACCACCGTTT
GCCAACCCCC GCAACGCGGC CGCCGGTAGT ATTAGGCAAC TCGACCCCCG GGTGACGGCG
GGGCGGAAGC TCGACTTCTT CGCCTACGGG ATAGGGCACT ATGAGGGGAT ATCCTTCTCC
ACCCACTGGG AGGTGCTCGA CTGGCTGGCG GAGCAGGGCT TTAGGGTGAA CGAGCACCGG
CGCCTCTTCT CCAGCATCGA CGAGGTCATA GACTACGTCT TGTCGTGGCA GAGCAAGCGC
TTTGACCTTC CTTACGTGAT CGACGGCATG GTGGTGAAGG TCAACTCGCT GGAAAGCCAA
GCGCGCTTAG GAGCCACCAT GAAGAGCCCG CGCTGGGCGG TGGCCTTCAA GTTCCCGCCG
GAAGAGGCAG TAACCAAGTT GAGGCGGATC GAAATAAGCG TGGGGAGGAC GGGGGTCTTG
ACCCCGGTAG CGGTCTTCGA CCCGGTGCAG ATAGCGGGTA CCACGGTTTC CCGGGCCACC
TTGCACAACG AAGACCTCAT CCGGGAAAAG GACATCCGGG TGGGGGACTA CATCGTGGTA
CACAAGGCGG GGGATGTCAT TCCCGAGGTG GTCCGCTCCC TGCCGGAGAG GCGCACAGGC
AACGAACAGA TCTTCCGTAT GCCCGACCAC TGCCCAGCCT GCGGAGCCAA GACCATAAGG
GAAGAAGGGG AAGTGGCCGT CCGCTGTCCC AACATCTCCT GCCCGGCCCG GCTTAAGGAA
AGCATTTTCC ACTTCGCCTC GCGCAACGCC ATGGACATAC GAGGCCTGGG CAAGGTGCTG
GTGGAGCAAC TGGTGGACCG GGGCCTGGTG AAAAACGTGG CCGACATCTA TTTCCTGCGC
CGGGAAGACC TCCTGCGCTT AGAGCGTATG GGGCCGAAGT CCACGGCCAA CCTTCTGCGG
GAAATCGAGG AGAGCAAGAG CCGGGGGCTC AACCGGCTGA TTTTCGGCCT GGGCATAAGG
CACGTGGGAG AGAGGGCGGC TAAGCTTCTG GCCGAGCACT TCGGCAGCAT CGATCGCCTG
GCTCAAGCCA CAGAGGAAGA GCTCACCGAG ATCCCGGAGA TAGGGCCGAA GATCGCCGCC
AGCGTGCGCG CCTTCTTTGC CGAACCCCGC AACCTGGAAG TGATCGAGCG GCTGAGAGAA
GCAGGAGTAA GGCTGGAGAC TACCAAAGAA GTACGGGAAG AGGGTCCGCT TAAGGGCAAG
GTTTTTGTGT TCACGGGGGC GCTCAAGAGC TTCACCCGGG AGGAAGCCAA GGCCTTAATC
GAGCGCCTGG GAGGAAGGGT GGCCTCCAGC GTGAGCCGGC GCACCGACTA CGTGGTGGTG
GGGGAGAACC CCGGCTCTAA GTACGACCGG GCGCGGGAGC TGGGGATAAA GATGCTGAAC
GAAGAGGAGT TCAAGCGGCT GCTGGGCCTA GAAAGCTAG
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| Protein sequence | MARRLSKEEA KRRIEELRRE IAYHDYRYYV LDSPVISDAE YDRLVLELMA LEEAFPEFIT
PNSPTQRVGG APREGFPTVR HLVPMLSLAN AFEPEDLRDF DRRVREALPG EKVEYVVEPK
IDGLAVSLLY RDGEFVQGAT RGDGEVGEDV TPNLRTIRSI PLRFLKDAPP LIEVRGEAFM
PKEAFVKLNE RREEAGEPPF ANPRNAAAGS IRQLDPRVTA GRKLDFFAYG IGHYEGISFS
THWEVLDWLA EQGFRVNEHR RLFSSIDEVI DYVLSWQSKR FDLPYVIDGM VVKVNSLESQ
ARLGATMKSP RWAVAFKFPP EEAVTKLRRI EISVGRTGVL TPVAVFDPVQ IAGTTVSRAT
LHNEDLIREK DIRVGDYIVV HKAGDVIPEV VRSLPERRTG NEQIFRMPDH CPACGAKTIR
EEGEVAVRCP NISCPARLKE SIFHFASRNA MDIRGLGKVL VEQLVDRGLV KNVADIYFLR
REDLLRLERM GPKSTANLLR EIEESKSRGL NRLIFGLGIR HVGERAAKLL AEHFGSIDRL
AQATEEELTE IPEIGPKIAA SVRAFFAEPR NLEVIERLRE AGVRLETTKE VREEGPLKGK
VFVFTGALKS FTREEAKALI ERLGGRVASS VSRRTDYVVV GENPGSKYDR ARELGIKMLN
EEEFKRLLGL ES
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