| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1076 |
|---|
| Symbol | |
|---|
| ID | 8491064 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1088105 |
|---|
| End bp | 1088551 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 646359094 |
|---|
| Product | heat shock protein Hsp20 |
|---|
| Protein accession | YP_003239053 |
|---|
| Protein GI | 260892956 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.713568 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGTC TGGTACCCTG GGATCCGTGG CGTGAGCTTC AGGAGTTGGA AGAGTCGATC
GACCGTCTTT TGAGCCGCCT GGCTCGTCCC TTCCGGGAAG AGAGGCGGCG ACTCGCCCCG
TGGTTTCCGG CGGTGGACGT GCTGGAAGAG GAAGATAACA TCGTGGTACG GGCCGACCTT
CCCGGCGTGA GCAAGGAAAA TGTGCGCATC TTGGTAAGCG ATGAAGAGAT CACCATAACC
GGAGAGGTTA AGCGGGAGGA AGAGGTTAAA GGCAAGAACT ACTACCGGAG CGAGCGGGCA
TACGGTAGCT TTTCCCGTAC CATCCCCTTG CCCGTGCCGG TAGAGCGGGA TAAGGCCAAG
GCCACCTTCA AGGATGGGGT GCTGGAAATC GTGGTCCCCA AGGCCAAGGG ACCCGGCCCC
AACCAGGTGG AGATAAGGCC CGAATAA
|
|---|
| Protein sequence | MARLVPWDPW RELQELEESI DRLLSRLARP FREERRRLAP WFPAVDVLEE EDNIVVRADL
PGVSKENVRI LVSDEEITIT GEVKREEEVK GKNYYRSERA YGSFSRTIPL PVPVERDKAK
ATFKDGVLEI VVPKAKGPGP NQVEIRPE
|
|---|
| |