Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeg_1070 |
Symbol | |
ID | 8491058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ammonifex degensii KC4 |
Kingdom | Bacteria |
Replicon accession | NC_013385 |
Strand | + |
Start bp | 1080741 |
End bp | 1082081 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 646359088 |
Product | RNA-directed DNA polymerase (Reverse transcriptase) |
Protein accession | YP_003239047 |
Protein GI | 260892950 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000276308 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATCCGC GGGGAACTGT GGGAGTGCCG AGCACCCTCC CGGCACCGAT GGAGCAACTC GGCGGAGACC CACGGTACTG CCTGATGGAA CAGGTAGTCG AGCGGGCCAA CATGACGAAG GCCCTGCGCC GAGTGGAGCG GAACGGAGGC GCAGCCGGAG TGGATGGGAT GGAGCCAGAA GCCCTACGCT CCTACCTGAA AGAACACTGG CCGCGCATCA AGGAAGAACT GCTCGCGGGG ACCTACCGGC CCATGCCGGT GCGCCGGGTC GAAATCCCGA AACCCGGTGG CGGCGTGCGG CTGTTGGGCA TCCCCACGGT GCTGGACCGC CTGATCCAGC AGGCCCTGCT TCAGGTACTG ACACCCATCT TTGACCCCGG GTTTTCCCCA CACAGCTACG GTTTCCGCCC GGGGCGCAGC GCCCACCAGG CGGTGGAGCA AGCCCGCAGG TACGTGGCCC AGGGCTACCG GCACGTGGTG GACCTCGACC TGGCACAATT CTTCGACCGC GTCAACCATG ACCTCCTGAT GGCCAGGGTG GCGCGGAAGG TGAAGGACAA GCGGGTACTC AAGTTAATAC GGGCCTACCT TCAGGCCGGA GTCATGATTA ATGGCTGCTG CGTACGCACG GAGGAGGGCA CCCCGCAGGG AGGGCCGCTG AGCCCGCTTC TGGCCAATAT CATTCTGGAC GACCTGGACA AAGAACTGGA GCGGCGCGGC CACAAGTTCG TAAGGTACGC CGATGACAGC AACGTTTACG TAAGAAGCTG CCGCGCCGGC CAGCGGGTGT TCGAGAGCCT GAAGCGCTTC CTGGAGCAAC GGCTCAAGCT ACGGATAAAC GAGGAAAAGA GCGCCGTGGA CTACGCCTGG CGGCGCGGAA TCCTCGGCTT TTCCTTCACC TGGGAAAAGG AGCCGCGCAT CCGGCTGGCA CCCCAGACGG TGAAGCGGTT CAAGCAGCGC ATCCGCTGGC TCACCAAGCG CAGCCGCAGT GTGAATATGG CCGAGCGTCT GGCGCGCCTC AACGAATACC TCAAGGGATG GATGGGCTAC TTTCGGCTGA TAGAGACCCC CAGCACACTG CAGGCCCTGG ACGAGTGGAT ACGGCGGCGA CTGCGCATGT GTCTGTTGAA GCAATGGAAG CGGCCCCGCA CCAGACGACG CAACCTGGTG GCCCTGGGCA TTCCTGAGGA CTGGGCGCGC CACATTAGCG GTTCGCGCAA AGGCTGCTGG CGGCTGGCGA ACACGCCCCA GGTGAACAAA GCCCTTGGCC TTGCCTACTG GCGCAGCCAA GGGCTGGTTA GCTTGGTCGA CCGGTACCGT GAACTTCGTA GTGCCTCATG A
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Protein sequence | MNPRGTVGVP STLPAPMEQL GGDPRYCLME QVVERANMTK ALRRVERNGG AAGVDGMEPE ALRSYLKEHW PRIKEELLAG TYRPMPVRRV EIPKPGGGVR LLGIPTVLDR LIQQALLQVL TPIFDPGFSP HSYGFRPGRS AHQAVEQARR YVAQGYRHVV DLDLAQFFDR VNHDLLMARV ARKVKDKRVL KLIRAYLQAG VMINGCCVRT EEGTPQGGPL SPLLANIILD DLDKELERRG HKFVRYADDS NVYVRSCRAG QRVFESLKRF LEQRLKLRIN EEKSAVDYAW RRGILGFSFT WEKEPRIRLA PQTVKRFKQR IRWLTKRSRS VNMAERLARL NEYLKGWMGY FRLIETPSTL QALDEWIRRR LRMCLLKQWK RPRTRRRNLV ALGIPEDWAR HISGSRKGCW RLANTPQVNK ALGLAYWRSQ GLVSLVDRYR ELRSAS
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