Gene Adeg_1050 details

Gene Information

• Locus tag: Adeg_1050
• ID: 8491036
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ammonifex degensii KC4
• Kingdom: Bacteria
• Replicon accession: NC_013385
• Strand: +
• Start bp: 1065065
• End bp: 1065727
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 646359071
• Product: Rhomboid family protein
• Protein accession: YP_003239032
• Protein GI: 260892935
• COG category: [R] General function prediction only
• COG ID: [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATACCGC TACGCGACAC CACCCTTTCG AGGCACTTCC CAATAGTGAC GGTGGCCATA 
ATAGCGGCCA ACCTTCTCAT CTTCCTTTAC GAGGTGAGTC TAAGCCACCG GGAGCTGGAC 
TTACTGGTGA GGGCCTTCGG AGTGGTTCCC GCCCGTGAAC TTGCTCACCT AGCGCTTGCT 
CCCTTTTCTT TTACAACTTA CCTTCCTTTC CTGACCTCTA TGTTTTTGCA CGGGGGCTGG 
GTTCACGTTC TGGGGAACAT GCTTTACCTG TGGGTTTTTG GAGACAATGT GGAAGACATT 
ATGGGGCGTT TTCGTTTTCT CGTATTCTAT CTCTTCACTG GGTTTATAGG AAGCCTTCTG 
CACATATGGA TGGATCCTGA TTCTCATATT CCCACCGTTG GAGCCAGCGG TGCCATAGCG 
GGAGTGTTGG GGGCTTATTT TGTAAGCTTT CCCCACTCGC GGGTGCTCAC TTTAGTGCCC 
ATATTCATCT TTCTCACCCT GGTCGAGTTG CCGGCCGTGC TGTTTCTCTT CCTCTGGTTC 
GGGCTGCAGC TTTTAAGCGG GGTGGCTTCT TTAGGGGTGC CGGGGGAGCC GGTAGCCTGG 
TGGGCTCACA TAGGGGGCTT TGTTTCTGGC GCGGTGCTGG TGCACGTCTT CCGGCGGCGC 
TAA 

 

Protein sequence

MIPLRDTTLS RHFPIVTVAI IAANLLIFLY EVSLSHRELD LLVRAFGVVP ARELAHLALA 
PFSFTTYLPF LTSMFLHGGW VHVLGNMLYL WVFGDNVEDI MGRFRFLVFY LFTGFIGSLL 
HIWMDPDSHI PTVGASGAIA GVLGAYFVSF PHSRVLTLVP IFIFLTLVEL PAVLFLFLWF 
GLQLLSGVAS LGVPGEPVAW WAHIGGFVSG AVLVHVFRRR