| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1043 |
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| Symbol | |
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| ID | 8491029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | + |
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| Start bp | 1059275 |
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| End bp | 1060192 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 646359065 |
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| Product | Type II secretion system F domain protein |
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| Protein accession | YP_003239026 |
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| Protein GI | 260892929 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.809436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGCGT GGCTTGGCCT TCTTTGGGGT TTAAGTCTAG CCTTTCTGGG TCTTTCCTTC
TGGAGCCACC GGCGGGAAAA AGAGACCAGT CTTTGTCGGC GGCTTGCCGA TCCCGATGTC
GAAGCGATCT GGCGGGAACA GGAGTTGAGG GAGCCTCTGT CCCGACGCAT TTTCAAGCCC
TGGCTGACGA AGCTGGGTAG GTTAGGTGGG CGCTTTTTGC CTGGAGGTAG CCGGAAGGAA
ATGTGGGCGA ATCTGTTGGC CATGGCCGGG CACCCCTGGG GATTAGGGGT GAACGAGTTC
CTGGCGCTCA AGGTGCTGGC GGCCTTGACC GGCGGAATGG CTTTTGTACT CTTTTTCTGG
CACCTTACGC CCTTCGCTGC TCCTCTGTGG GGGGTGGTAG GGTGGCTCTT GGGCTTTCTT
TTCCCCGATT TTCTGCTTCG GAGCCGCATC CGCCGACGTC AGCGGGAGGT GAGACGGCAG
CTGCCAGAGG TGATCGACCT GCTTACCGTG AGTGTGGAGG CAGGATTAGG GTTTGAGGGG
GCGCTCACGC GGGTGGTGGA GAAGATGGAC GGTCCCCTGC CCCAGGAGAT CTGCCGGGCC
CTGCAAGAGA TAAGGGTGGG GAGGCCGCGG CGGGAGGCGC TGCGGGAGAT GGCCCAGAGG
ATAGGAGTGG AAGAGCTCCT CTCCTTTGTA GGGGCAGTGA TCATGGCCGA GCAAATGGGC
GTTTCCTTGG CTAGAGTGCT ACGCCTGCAG TCCCAGGAGA TACGCCGCCG GCGCCGGCAG
CAGGCGCAGG AAGCTGCCTT CAAAGCACCT GTGAAGATGC TTCTTCCTCT GGTACTTTGC
ATTTTTCCGG CCACTTTCGT AGTGTTGCTC GGCCCGGCGG TGCTGCGGAT AATGCGTTTC
TTCGGCAAGA GCTTTTGA
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| Protein sequence | MGAWLGLLWG LSLAFLGLSF WSHRREKETS LCRRLADPDV EAIWREQELR EPLSRRIFKP
WLTKLGRLGG RFLPGGSRKE MWANLLAMAG HPWGLGVNEF LALKVLAALT GGMAFVLFFW
HLTPFAAPLW GVVGWLLGFL FPDFLLRSRI RRRQREVRRQ LPEVIDLLTV SVEAGLGFEG
ALTRVVEKMD GPLPQEICRA LQEIRVGRPR REALREMAQR IGVEELLSFV GAVIMAEQMG
VSLARVLRLQ SQEIRRRRRQ QAQEAAFKAP VKMLLPLVLC IFPATFVVLL GPAVLRIMRF
FGKSF
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