Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeg_1041 |
Symbol | |
ID | 8491027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ammonifex degensii KC4 |
Kingdom | Bacteria |
Replicon accession | NC_013385 |
Strand | + |
Start bp | 1056980 |
End bp | 1058314 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 646359063 |
Product | type II secretion system protein E |
Protein accession | YP_003239024 |
Protein GI | 260892927 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.437209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTTTTT ACGGGCCTTT TTCGACCGGT GAACGGAGCC TATCCGGAGG AAAACCTTCC TCTCGCTCAA AAACCGAAAT TTACCAGGAT CTGAAGGTGC AGCTTCACAA GCTTTTGGTA GCGGAGCTGG GCGATCGCTT CACCGGCGGC ACCGGCGTTT CCAGTGAAGA GGTAGAGCGG GTGGCAAGGA CGCTGGTGGA GAGGCACGGA GGCAACCTCC CTCGTTTTGA GCAGCAGCGC TTGGCGGAAG AGCTGGTACA AGAAGCTTTG GGGCTGGGCC CCATCACCCC TTTCCTGGAA GACCCAGAAA TTTCGGAGAT CATGGTCAAT GGCCCGCACC AGGTTTACGT AGAGCGCAAG GGAAAACTGG AGCTGACCCC GGTCACCTTC CGCGACGACG CCCACGTTCT CCAGATCATC GAGCGCATTG TGGCTCCCTT GGGAAGGCGG ATAGACGAAA GCGTCCCCAT GGTGGATGCC CGCCTGCCGG ATGGCTCACG GGTGAACGCT ATAATTCCCC CTCTGAGCTT GAACGGGCCG GTCCTCACCA TCCGTAAGTT CTCCGCCACC CCGCTTACCA TGGAAGATCT CATCCGCCTG GGAACTCTTA CTCCTTCCAT GGCCCGTTTC TTGGAGGCCT GCGTAAAGGC GCGGCTCAAT ATCGTGGTCT CGGGCGGGAC GGGCAGCGGT AAAACTACTC TTTTGAACGT GCTCTCTTCC TTTATCCCGC CCGACGAGCG GATCATCACC ATCGAGGATG CAGCCGAGTT GCAGCTTCGG CAGGAGCACG TGGTGCGCCT GGAGTCCCGT CCTCCCAACA TCGAAGGGAA AGGAGCGGTG ACCATCCGGG ATCTGGTGCG CAACGCTTTG CGCATGCGCC CCGACCGCAT TGTGGTAGGC GAGGTGAGGG GCGGGGAGGC GCTCGACATG CTGCAGGCCA TGAACACCGG GCACGACGGT AGCCTTACCA CCGCCCACGC CAATTCCCCC CGCGACCTCC TCTCCCGCCT CGAGACGATG GTCTTAATGG CAGGGATGGA GCTCCCGGTG CGGGCTATCA GGGAGCAGAT CGCTTCGGCG CTGGATCTCA TAGTGCATGC CAGCCGCTTT AAGGATGGCT CGCGCAAGGT GACCCACATA ACCGAGGTGC AGGGAATGGA GGGGGATGTG ATCGTGCTGC AGGACCTTTT CCTCTTCCGC CAAACGGGAG TGGGGCCGGA CGGCAAGGTT TTAGGGGAGT TTGTCTGCAC GGGCATCCGC CCCCGCTGCG CCGAGCGGCT GGCTGCGGCC GGCATAGAGC TGGATGGTCG CCTTTTCGCT CCCTCCTCTT GGTAA
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Protein sequence | MPFYGPFSTG ERSLSGGKPS SRSKTEIYQD LKVQLHKLLV AELGDRFTGG TGVSSEEVER VARTLVERHG GNLPRFEQQR LAEELVQEAL GLGPITPFLE DPEISEIMVN GPHQVYVERK GKLELTPVTF RDDAHVLQII ERIVAPLGRR IDESVPMVDA RLPDGSRVNA IIPPLSLNGP VLTIRKFSAT PLTMEDLIRL GTLTPSMARF LEACVKARLN IVVSGGTGSG KTTLLNVLSS FIPPDERIIT IEDAAELQLR QEHVVRLESR PPNIEGKGAV TIRDLVRNAL RMRPDRIVVG EVRGGEALDM LQAMNTGHDG SLTTAHANSP RDLLSRLETM VLMAGMELPV RAIREQIASA LDLIVHASRF KDGSRKVTHI TEVQGMEGDV IVLQDLFLFR QTGVGPDGKV LGEFVCTGIR PRCAERLAAA GIELDGRLFA PSSW
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