Gene Adeg_1041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeg_1041 
Symbol 
ID8491027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAmmonifex degensii KC4 
KingdomBacteria 
Replicon accessionNC_013385 
Strand
Start bp1056980 
End bp1058314 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content61% 
IMG OID646359063 
Producttype II secretion system protein E 
Protein accessionYP_003239024 
Protein GI260892927 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4962] Flp pilus assembly protein, ATPase CpaF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.437209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTTTT ACGGGCCTTT TTCGACCGGT GAACGGAGCC TATCCGGAGG AAAACCTTCC 
TCTCGCTCAA AAACCGAAAT TTACCAGGAT CTGAAGGTGC AGCTTCACAA GCTTTTGGTA
GCGGAGCTGG GCGATCGCTT CACCGGCGGC ACCGGCGTTT CCAGTGAAGA GGTAGAGCGG
GTGGCAAGGA CGCTGGTGGA GAGGCACGGA GGCAACCTCC CTCGTTTTGA GCAGCAGCGC
TTGGCGGAAG AGCTGGTACA AGAAGCTTTG GGGCTGGGCC CCATCACCCC TTTCCTGGAA
GACCCAGAAA TTTCGGAGAT CATGGTCAAT GGCCCGCACC AGGTTTACGT AGAGCGCAAG
GGAAAACTGG AGCTGACCCC GGTCACCTTC CGCGACGACG CCCACGTTCT CCAGATCATC
GAGCGCATTG TGGCTCCCTT GGGAAGGCGG ATAGACGAAA GCGTCCCCAT GGTGGATGCC
CGCCTGCCGG ATGGCTCACG GGTGAACGCT ATAATTCCCC CTCTGAGCTT GAACGGGCCG
GTCCTCACCA TCCGTAAGTT CTCCGCCACC CCGCTTACCA TGGAAGATCT CATCCGCCTG
GGAACTCTTA CTCCTTCCAT GGCCCGTTTC TTGGAGGCCT GCGTAAAGGC GCGGCTCAAT
ATCGTGGTCT CGGGCGGGAC GGGCAGCGGT AAAACTACTC TTTTGAACGT GCTCTCTTCC
TTTATCCCGC CCGACGAGCG GATCATCACC ATCGAGGATG CAGCCGAGTT GCAGCTTCGG
CAGGAGCACG TGGTGCGCCT GGAGTCCCGT CCTCCCAACA TCGAAGGGAA AGGAGCGGTG
ACCATCCGGG ATCTGGTGCG CAACGCTTTG CGCATGCGCC CCGACCGCAT TGTGGTAGGC
GAGGTGAGGG GCGGGGAGGC GCTCGACATG CTGCAGGCCA TGAACACCGG GCACGACGGT
AGCCTTACCA CCGCCCACGC CAATTCCCCC CGCGACCTCC TCTCCCGCCT CGAGACGATG
GTCTTAATGG CAGGGATGGA GCTCCCGGTG CGGGCTATCA GGGAGCAGAT CGCTTCGGCG
CTGGATCTCA TAGTGCATGC CAGCCGCTTT AAGGATGGCT CGCGCAAGGT GACCCACATA
ACCGAGGTGC AGGGAATGGA GGGGGATGTG ATCGTGCTGC AGGACCTTTT CCTCTTCCGC
CAAACGGGAG TGGGGCCGGA CGGCAAGGTT TTAGGGGAGT TTGTCTGCAC GGGCATCCGC
CCCCGCTGCG CCGAGCGGCT GGCTGCGGCC GGCATAGAGC TGGATGGTCG CCTTTTCGCT
CCCTCCTCTT GGTAA
 
Protein sequence
MPFYGPFSTG ERSLSGGKPS SRSKTEIYQD LKVQLHKLLV AELGDRFTGG TGVSSEEVER 
VARTLVERHG GNLPRFEQQR LAEELVQEAL GLGPITPFLE DPEISEIMVN GPHQVYVERK
GKLELTPVTF RDDAHVLQII ERIVAPLGRR IDESVPMVDA RLPDGSRVNA IIPPLSLNGP
VLTIRKFSAT PLTMEDLIRL GTLTPSMARF LEACVKARLN IVVSGGTGSG KTTLLNVLSS
FIPPDERIIT IEDAAELQLR QEHVVRLESR PPNIEGKGAV TIRDLVRNAL RMRPDRIVVG
EVRGGEALDM LQAMNTGHDG SLTTAHANSP RDLLSRLETM VLMAGMELPV RAIREQIASA
LDLIVHASRF KDGSRKVTHI TEVQGMEGDV IVLQDLFLFR QTGVGPDGKV LGEFVCTGIR
PRCAERLAAA GIELDGRLFA PSSW