| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1023 |
|---|
| Symbol | |
|---|
| ID | 8491009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1037355 |
|---|
| End bp | 1038164 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 646359045 |
|---|
| Product | formamidopyrimidine-DNA glycosylase |
|---|
| Protein accession | YP_003239006 |
|---|
| Protein GI | 260892909 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAGC TGCCGGAAGT GGAAACCATA CGCCGTCAGC TGGCGGAGAA GGTGATTGGG
GCACGCATCA AGAGGGTGGA AGTCCGGCGG GCCGCGGTGA TGACGAACCC TATACCTGGC
CTAGATCTTC TGTCGGGAAA AACAATAACC GGGGTTTCCC GGCGGGGAAA GTGGCTCTGG
CTCTCTTTAG AGGGAGATTT GGCCTTGCTT TTCCATCTGG GAATGACAGG GCAGCTAGTT
TGGGAAGAAG AAGGGGAGCT TCCCCCACAC ACCCACCTTT TGATCGAGCT TGACCGAGGA
AGGCTGCGCT TCACCGACTT CCGGCGATTT GGCCGGGTAA GGCTGGGAAA GAGCGAGGAA
ATTCGGGACT ACCTGGAGGA AAAGCTCGGC CCCGAACCTT TATCCCCCGC TTTCTCCGTT
AGTTACTTGA AAAACGCCTT GGCAAGAAGC CGGCGCCCGA TAAAGGCCCT GTTGCTAGAA
CAGAAGGCGG TAGCCGGGCT AGGAAACATT TACACCGACG AGGCTCTTTT CCTGGCTGGT
ATCGATCCCC GGCGTCCTGC CTGCACCCTC ACCGAAGACG AGGTAAAGAG ACTGCACGAA
GCCATAAAAG GAGTGCTGGC AGAAGGCATA AGGCACCGGG GAACCAGTAT ACGCAACTAT
GTTGATGCCG AGGGGACGCC GGGGGAACAC AGCCTTTTCC TGCGCGTTTA CGGTCGGGAA
GGCCAGCCCT GTCCCCGCTG CGGCACTCCT ATAAAGAAAA TTAAACTTTC CGGGCGAGGA
ACCCACTTTT GCCCTCACTG TCAGCACTGA
|
|---|
| Protein sequence | MPELPEVETI RRQLAEKVIG ARIKRVEVRR AAVMTNPIPG LDLLSGKTIT GVSRRGKWLW
LSLEGDLALL FHLGMTGQLV WEEEGELPPH THLLIELDRG RLRFTDFRRF GRVRLGKSEE
IRDYLEEKLG PEPLSPAFSV SYLKNALARS RRPIKALLLE QKAVAGLGNI YTDEALFLAG
IDPRRPACTL TEDEVKRLHE AIKGVLAEGI RHRGTSIRNY VDAEGTPGEH SLFLRVYGRE
GQPCPRCGTP IKKIKLSGRG THFCPHCQH
|
|---|
| |