Gene Adeg_0961 details

Gene Information

• Locus tag: Adeg_0961
• Symbol: rnc
• ID: 8490947
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ammonifex degensii KC4
• Kingdom: Bacteria
• Replicon accession: NC_013385
• Strand: +
• Start bp: 973239
• End bp: 973946
• Gene Length: 708 bp
• Protein Length: 235 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 646358985
• Product: ribonuclease III
• Protein accession: YP_003238946
• Protein GI: 260892849
• COG category: [K] Transcription
• COG ID: [COG0571] dsRNA-specific ribonuclease
• TIGRFAM ID: [TIGR02191] ribonuclease III, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGGACTCG CCAAGCTGAA GGACAAGCTG GGAATAAGCT GGAAGGAGGA GAAACTCCTC 
CGCTTAGCTT TAACCCATCC CTCCTATGCC TACGAGCACC CGGGAGTAGA ACATAACCAG 
CGTTTGGAGT TTTTAGGTGA CTCCGTCCTT TCTCTAGTGG TAAGCGACTA CCTTTACCGC 
ACCTTTCCCG AAAAGAGCGA AGGAGAGCTC ACGCGGTTGC GGGCTGCGGT GGTCTGCGAG 
GCCAGCCTGG CCCGGGTGGC CGAGGAACTG GGGATCGGGG AGGCTTTGCT TCTGGGGCGG 
GGGGAGGAAA AATCTGGAGG AAGAAAAAGG CCTTCCTTGC TGGCTGATGC TTTCGAGGCC 
CTTCTGGGGG CCATTTATCT CGACCAGGGG CTGGAGGTGG CTTCTGCCTT CGCTCTCCAT 
CTCCTCCGGC CGGTGCTGCA GGACGTCCTG GAGGGGCGGG TAGAGCGGGA TTACAAGACC 
GAGCTGCAGG AGCTCTTGCA GAAGGGCTCG CCGGAGAAGA TAGTCTACGA GGTCTTGCAG 
GAAGAAGGGC CAGATCACGC CAAGCGCTTC CTGGTAGGGG TTTACTACCA GGGGAAGTGC 
CTGGGACGCG GCGAAGGGCG TTCCAAGAAG GAGGCCGAGC AGCGGGCGGC GCGCGAGGCT 
TGGCTTAAGC TTTCAGGCGG GGAGGAGGGT AGCGATGGGA CTTTTTGA 

 

Protein sequence

MGLAKLKDKL GISWKEEKLL RLALTHPSYA YEHPGVEHNQ RLEFLGDSVL SLVVSDYLYR 
TFPEKSEGEL TRLRAAVVCE ASLARVAEEL GIGEALLLGR GEEKSGGRKR PSLLADAFEA 
LLGAIYLDQG LEVASAFALH LLRPVLQDVL EGRVERDYKT ELQELLQKGS PEKIVYEVLQ 
EEGPDHAKRF LVGVYYQGKC LGRGEGRSKK EAEQRAAREA WLKLSGGEEG SDGTF