| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0955 |
|---|
| Symbol | |
|---|
| ID | 8490941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 967899 |
|---|
| End bp | 968912 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 646358979 |
|---|
| Product | fatty acid/phospholipid synthesis protein PlsX |
|---|
| Protein accession | YP_003238940 |
|---|
| Protein GI | 260892843 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0416] Fatty acid/phospholipid biosynthesis enzyme |
|---|
| TIGRFAM ID | [TIGR00182] fatty acid/phospholipid synthesis protein PlsX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0071309 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGGGTAG CGCTTGACGC CATGGGAGGA GATTACGCTC CGGAGGCCAC GGTGGAAGGA
GCCGTGGCGG CCGTTAAAAG CTTCGAGGAG ATAGAAGTCT ACCTGGTGGG GCCGGAGGAG
CGCTTACGGC CCTTAATTCC TGCCGACCTT GGAGAGAAAA TAAAGCTCGT TTCCGCTTCA
GAAGTCATCG AGATGGGAGA GTCGCCAGTT CAAGCGGTCA GGCGCAAAAG GGCTTCCTCT
CTGGTGAGGA CGGTGGAACT ACTCAAAGAG GGGCAGGTAG ATGCCGCCGT ATCGGCCGGT
AACACCGGTG CTTTGCTGGC GGCAGCTTCT CTTTACCTGG GACGCATCCC CGGCGTGGAA
AGACCGGCCC TGATGGCCCA GCTCCCCAAC CCGAGGGGAC GCACCGTGCT TTTAGACGTG
GGAGCCAATG TAGATGTGAA GCCTCATCAC CTGGCGCAGT TTGCCGTTAT GGGTTCCATT
TATGCGCGCG ACATGCTGGG AATAGCCTCT CCCCGCGTAG GTCTTTTGAG CATCGGCGAA
GAGGAGACCA AGGGTAATGA ACTCACCTTA GCCACCTTCC CTCTTCTGCG CAAGCTTCCC
CTCAATTTCA TAGGTAACGT AGAAGGAAGG GATGTTTTCA ACGGCCGGGC AGATGTGGTA
GTTTGCGACG GCTTTGTGGG CAACGTGCTT TTGAAGGCCG GGGAGGGGCT GGTGCAAGCG
CTGGAAGCCA TGTTGCGCCA GGAACTGGCC CGCAACCTAC CAGCCAGGAT TCTGGCCCTG
GCTACTTTCT TTTTCCTGCG CAATTTCCGA AAGCGCTTGG ACTACGCCGA GTACGGCGGT
GCCCCCCTGC TGGGGGTAAA CGGGGTGGTG GTGGCGGCCC ACGGCTGTTC CCGAGGAAAC
GCCATAAAGA ACGCCTTGCG AGTGGCCGTG GAAGCGGTGC GTTGCGACCT GGTAGCCACC
ATCACCAAAG GAATAGCCTT GCTCAAGCGA GAGAAAGGGG TAGAGGTTAG TTGA
|
|---|
| Protein sequence | MRVALDAMGG DYAPEATVEG AVAAVKSFEE IEVYLVGPEE RLRPLIPADL GEKIKLVSAS
EVIEMGESPV QAVRRKRASS LVRTVELLKE GQVDAAVSAG NTGALLAAAS LYLGRIPGVE
RPALMAQLPN PRGRTVLLDV GANVDVKPHH LAQFAVMGSI YARDMLGIAS PRVGLLSIGE
EETKGNELTL ATFPLLRKLP LNFIGNVEGR DVFNGRADVV VCDGFVGNVL LKAGEGLVQA
LEAMLRQELA RNLPARILAL ATFFFLRNFR KRLDYAEYGG APLLGVNGVV VAAHGCSRGN
AIKNALRVAV EAVRCDLVAT ITKGIALLKR EKGVEVS
|
|---|
| |