| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0942 |
|---|
| Symbol | |
|---|
| ID | 8490928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 958571 |
|---|
| End bp | 959350 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 646358967 |
|---|
| Product | band 7 protein |
|---|
| Protein accession | YP_003238928 |
|---|
| Protein GI | 260892831 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.69232 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTCTT TCCTGGCCAC CCTTTTTGTG CTGGCCCTCA TGCTCTTGGC CGCCTCGGTA
CGCATAGTTC AGGAGTACGA ACGCGGGGTC ATCTTCCGGC TGGGGCGCTG CGTGGGAGCG
CGTGGTCCCG GGCTTTTCCT GTTGATACCC TTCATCGAGA AGATGCGCAA GGTAGACCTG
CGCGTGGTCA CCATGGAGGT TCCTACCCAG GAGGTCATCA CCCGGGATAA CGTCACCGTA
AAAGTGAACG CTGTGGTTTA CTTCCGGGTG ATCAACCCGG TGGACGCAGT GATCAAGGTG
CTCGACCCGG TTTACGCCAC CTCCCAGCTT GCCCAGACCA CCCTGCGTTC GGTGCTGGGG
CAGTCGGAAC TGGACGAACT TTTGGCCCAC CGGGAGGCTA TAAACCAGCG CCTGCAGCGG
ATTATAGACG AGGGAACCGA GCCCTGGGGG GTGAAAGTAA GTCTGGTCGA AGTGCGGGAC
GTAGAGCTCC CTGCCTCGTT GCAGCGGGCC ATGGCAGCTC AGGCCGAGGC GGAGCGGGAG
CGCCGGGCCA AGATAATTCA CGCCGAGGGT GAGTTGCAGG CGGCGCAGAA GCTGGCGGAG
GCGGCGCGGA TAATCCAAGC TGAACCAGCT GCTATCCAGC TACGTTACCT GCAGACTCTG
CGAGAAATAG CGGCGGAAAA CGCCAGCACC ATCGTCTTTC CCCTGCCGCT CGAGATGCTG
CGCCCCTTGA TGCATCTCAT GGAAGTGCGA AAAGAAGGAA AAACGGAAAC GCCCTCGTAA
|
|---|
| Protein sequence | MFSFLATLFV LALMLLAASV RIVQEYERGV IFRLGRCVGA RGPGLFLLIP FIEKMRKVDL
RVVTMEVPTQ EVITRDNVTV KVNAVVYFRV INPVDAVIKV LDPVYATSQL AQTTLRSVLG
QSELDELLAH REAINQRLQR IIDEGTEPWG VKVSLVEVRD VELPASLQRA MAAQAEAERE
RRAKIIHAEG ELQAAQKLAE AARIIQAEPA AIQLRYLQTL REIAAENAST IVFPLPLEML
RPLMHLMEVR KEGKTETPS
|
|---|
| |