Gene Adeg_0868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeg_0868 
Symbol 
ID8490853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAmmonifex degensii KC4 
KingdomBacteria 
Replicon accessionNC_013385 
Strand
Start bp882018 
End bp882770 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content56% 
IMG OID646358895 
Productpolysaccharide deacetylase family sporulation protein PdaB 
Protein accessionYP_003238857 
Protein GI260892760 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID[TIGR02764] polysaccharide deacetylase family sporulation protein PdaB 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0275636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGTGT TTTACCTGAA TCTCCGGCGT CTCAAAGAGG GTCTGCTCTT GCTCGGAGGA 
GTAGCGTTTA TAGGGGGACT AGTAGTTCTT GGCCTCCTGA GAGAACCCGC CGCTTCCCCG
ACCAGTACCT CCTCTTCCCC CATCGTCTAC CGGGTACGCA CCGAGGAGAA GCTGGTGGCC
CTCACCTTCG ACATAAGCTG GGGGACGGAA ACTCCTCCCA AGGTGCTCGA TCTCCTAAAA
AAAGAAAACG TTAAGTGCAC CTTTTTCCTC TCTGGACCCT GGGTAAAGAA GTATCCGGAG
CTGGCCCGAC GGATAGCCGA GGATGGACAC GAAATTGCCA GCCATGGACA CCGCCACATA
AACTTGAGTC CCCTTCCACC GGGAGAGATA AGGACAGAGA TCAGCCGGGC CCACGAGACC
ATAAAAGAGG TAACGGAGAA GACCCCTAAG CTCATCCGCA CGCCCAACGG CGATTACAAC
GCCAAGGTGC TAAAGGTGGC TAAGGATATG GACTACACGG TAATCCAGTG GGATGTGGAC
TCCCTTGACT GGAAAAATCC GGGAGTAAAT ACCATCATCG CGCGCGTCCT CAAAAACGTG
CGCCCGGGGA GCATAGTGCT GCTTCACGCT AGCGACACCT GCCAGCAGAC CCACCTGGCC
CTTCCCGCTA TCATCCAGGG GCTTAAAGAA AAAGGTTACC GCATGGTAAC CGTATCGGAG
CTTTTGCGGT ACGGTCCGGG AGTGGCCGAA TGA
 
Protein sequence
MRVFYLNLRR LKEGLLLLGG VAFIGGLVVL GLLREPAASP TSTSSSPIVY RVRTEEKLVA 
LTFDISWGTE TPPKVLDLLK KENVKCTFFL SGPWVKKYPE LARRIAEDGH EIASHGHRHI
NLSPLPPGEI RTEISRAHET IKEVTEKTPK LIRTPNGDYN AKVLKVAKDM DYTVIQWDVD
SLDWKNPGVN TIIARVLKNV RPGSIVLLHA SDTCQQTHLA LPAIIQGLKE KGYRMVTVSE
LLRYGPGVAE