Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeg_0821 |
Symbol | |
ID | 8490806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ammonifex degensii KC4 |
Kingdom | Bacteria |
Replicon accession | NC_013385 |
Strand | + |
Start bp | 830830 |
End bp | 832851 |
Gene Length | 2022 bp |
Protein Length | 673 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 646358851 |
Product | TRAG family protein |
Protein accession | YP_003238813 |
Protein GI | 260892716 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.153462 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAGAGGC TGGTCGGCGC TTTTTCTTCC TTGCTGGGAG GGCTGAAGGT CCGGCTGGAG GGGAGCCGCG GCCTCCTTTT GCGCTGGCTC GTCCTTTTGC CGGTGGTCTT CTTTCTGGAC GTGTGGCTGC TGGCGCCGGT GGCGGCGTGG CTGGTGGGGT ACCGGGAGTC GGCCGCGGGT TTGACTCCCT CCGTCCCCGG TCCCGGGTGG TACTTCGCAC ACCCCTTTCA GGTGGCGTGG TCCTTTTGCC TTCACCTGCT GGGCTTGAGG GACCTGACGG CTCCCGCCGT CTTCCGGGTC TGGCTCGTCC TGAGCCTCTG CCTGGCGGTG GGGGCGGCGC TGGTCTGGTA CAGGCTGATG TACGGCGAGG CCCTGGTGGG GGAGGCGGTG GGGAGATCCA CGCCCGGCGG CACGGCGCGG TGGAGCTCTC CCTTCGCCCT GCGGGAGTAC TTCGGCTTTT CCTGGTCCAC ACCGGGGTAC GTCCTGGGCG GCGTGCCCGT CGGGATAGGT GTGAGGCCCG TGGTGCTGAA GGAGGACGCT CCCGGGAACC GGAACGTGGC GGTGTTCGGG CCGCCTGGCC GGATGAAGTC GGTGGGGCCG ATAAGGTGCA ACTTGTTTCA GGCGGCGGTC TCGGGGACGA GCGTGGTGGT GACGGACCCG AAGGGGGAGC TGGTGAGGGA CTTCCGGAGG TTCTTCGAGA AGAACGGGTA TGTGGTGAAG GTCTTCAACC TTGTGTCGAT GCTCAACTCC GACCGGTGGA ACCCGCTCTC TGAAGTGAAG AGCGGTCTTG ACGCGCAGCT CTTCACCTCG GTGGTGATAG CGAACACGCA GGTGCCCGGC AGGAAGGGGG GCGACCCCTT CTGGGACCGC GCGGAGATGA ATCTTCTCAA GGCGCTGGTC CTGTACGTCG TGAGCGAGGT GCCGCGGGCG CAGAGGAACC TGGGGACGCT CTACCGCGTC CTGGCTTCCG GGGACTCCAA GGCGCTGGAC CGGACTTTTC AGGCCCTGCC TCCGGACCAT CCCGCGAAGC TGCCGTACAA CCTGTTCCTG GAGACCTCGG GGACGGTGCG CTCGGGGGTG ATAATCGGGC TGGGGACGCG GCTTGAGGTC TTCCAGGACC GGCTGGTGTG CGCCCTGACC TCGGCCTCGG ACATAGACCT GGAGCTTCCG GGGAAGGAGA GGTGCGCGTA CTTCTGCGTC CTCCCGGACA CGGACTCCGC GTTCAACTTC CTGGCTTCCC TCTTTTACAG CTTCCTGTTC ATCAAGCTGA CGCGGCTGGC CGACAGGCAG CCCGGGGGCA GGCTTCCCGT CCCGGTGCAC TTCCTGCTGG ACGAGTTCTG CAACATACCG CAGATCCCGG AGTTCGAGAA GAAGATATCG ACCATGCGGG GGCGCGGGAT CGGGGTGACG GTGGTGTTTC AGAACATACC GCAGCTCATG AACCTTTACG GGCAGGGGCT GTGGGAGATC ATCCTGGGGG ACTGCGACTA CTGGCTCGTG CTGGGCGGGG TGGAGAGGTC GACGGCCGCG TACGTCTCCG ACATCCTGGG GCACACGTCG GTGAAGAAGG TGACCGAGCA GAGGCCGAAG GGTATAATGA AGTGGCTCGA CCCCTGGGAG GGGAGGGAGA CGGAGGGCGT GGAGAGGGCG CCTCTGATGA ACCTTTCGGA GGTGACGAGG CTCGGGCTCG ACGAGTGCCT GGTGCGGGTG GCGGACGGGC GGGTGGTGAA GCTCAGGAAG CTGCCGTACT GGCGGCACCC GCTTTACAGG GAGCTCGAGC CCGCGCACGT GCTGGAGTAC CGGCCCGCGT GGGCGGAGTC GTGGCGCGAG GAGCCCGGGG AGGGTGCCGG AGGGTCTGCC GTCCGCCGGG ACGGAGAAGC AGGAGAGGGA GGAGAGGGGA GGTCTCCGGT CCCGCGGGAC GGTGATCCCG GCGGGGGAGG TGGAGCTCCG GCGTCGCCCG GCGGGCCCGG GTCTCCGTCC GGCCGGACGG GGGAAGCGGG AGGAGAAGGC TTCTGGGCGT AG
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Protein sequence | MERLVGAFSS LLGGLKVRLE GSRGLLLRWL VLLPVVFFLD VWLLAPVAAW LVGYRESAAG LTPSVPGPGW YFAHPFQVAW SFCLHLLGLR DLTAPAVFRV WLVLSLCLAV GAALVWYRLM YGEALVGEAV GRSTPGGTAR WSSPFALREY FGFSWSTPGY VLGGVPVGIG VRPVVLKEDA PGNRNVAVFG PPGRMKSVGP IRCNLFQAAV SGTSVVVTDP KGELVRDFRR FFEKNGYVVK VFNLVSMLNS DRWNPLSEVK SGLDAQLFTS VVIANTQVPG RKGGDPFWDR AEMNLLKALV LYVVSEVPRA QRNLGTLYRV LASGDSKALD RTFQALPPDH PAKLPYNLFL ETSGTVRSGV IIGLGTRLEV FQDRLVCALT SASDIDLELP GKERCAYFCV LPDTDSAFNF LASLFYSFLF IKLTRLADRQ PGGRLPVPVH FLLDEFCNIP QIPEFEKKIS TMRGRGIGVT VVFQNIPQLM NLYGQGLWEI ILGDCDYWLV LGGVERSTAA YVSDILGHTS VKKVTEQRPK GIMKWLDPWE GRETEGVERA PLMNLSEVTR LGLDECLVRV ADGRVVKLRK LPYWRHPLYR ELEPAHVLEY RPAWAESWRE EPGEGAGGSA VRRDGEAGEG GEGRSPVPRD GDPGGGGGAP ASPGGPGSPS GRTGEAGGEG FWA
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