| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0804 |
|---|
| Symbol | |
|---|
| ID | 8490789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 811072 |
|---|
| End bp | 812202 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 646358834 |
|---|
| Product | protein of unknown function DUF324 |
|---|
| Protein accession | YP_003238796 |
|---|
| Protein GI | 260892699 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01898] CRISPR-associated RAMP protein, Cmr6 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.505902 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGTCAG ATTGTTTAAA GCAGAACTTG CCACCGTGTC TAAAAGAGAA AGACACCGGG
GAGTCATTTT GTTTCGCCAG CTGCGCCTTC CACTTGGATG CTTACGGCTG GAAGAAAGAT
TTTGTCACAG AACGATACCT AAGCAATATT CGCGGCAAGG ATAAGGAACT TTCCATAAAA
ATTAAGGAGA TGACCGACAT AGGTGTTATT CCCGCGCCCT CTCCGCAGCG CCTCTTCGCT
CTCCCGCCGG GCAGCTTCTG CGTAAGCTTC AGCTTCCAGC TCCGGCGGCC CTACATCTCG
AAGGACGACA CGGAATTTTA CGTCATCGAC AACCCGGTGA AGAAGGACTG GGTCTTCAAG
GTGCCCTACA TCGCACCCTC CCAGTGGAAG GGCTGCCTGC ACGCCGCCAT GGTCCGGCAG
CTGGCCGACT GGTGGGCGAA CCCGTCGAAA AACGAGCGTG GCAAAGACCC GTCGGGAGGC
GAGCGCAGCA AAAAAGGAGA GGAGTTTGTC AGTCGCCGGC TGCAGCTCGT GCGCCTCTTC
GGGAACGAGC AGGGGGTGGA GGTGGACACT AAAAAGTTCG ACAGCTACCT GGACAAGGTG
GGCGGGGACG AGCTGGCGGG GGACTACCGC GCGAAGCTCA AGAGGATCGT CCCCGAGGGC
CACCGCCGCG GCCGGCTGAT GTTCTACCCC ACCTTCTTCG ACCGGATCGG CGTGGAGGTC
ATCAACCCCC ACGACCGCGA GACCGGTGCC GGCAAGCTCC CCGTCTACTT CGAGACCGTC
CCGGAAGGCA CCTGCGGCCG CTTCGCCCTG CTCTACGTCC CCTTCGACCG GGCGGGCAAG
GACGAGGGCG AAACCCTGCG CGAAGCGGCG GCAGACCTCT GCCGCGTGGC CGAGGGGATA
GCGTTTCTTC TCACCGAGTT CGGCATCGGG GCCAAGACCG CCGACAGTTT CGGCCTGGCC
GCCGGGGAGC TGCCCTCCGA GGGGGTGGTG GCCGTGCGGC TGGCGGGGAA GGACGAGAGT
TCGGTGAAGA CGGGCAAGTT CAGGCTGCTT GACAGCCAGA ACTCCGAAGG TCTGGTTAAG
ACAGCGGAAA CGCTGTCCCA GTCGCTCGCC CGGGGAGGTG GCAACCGATG A
|
|---|
| Protein sequence | MLSDCLKQNL PPCLKEKDTG ESFCFASCAF HLDAYGWKKD FVTERYLSNI RGKDKELSIK
IKEMTDIGVI PAPSPQRLFA LPPGSFCVSF SFQLRRPYIS KDDTEFYVID NPVKKDWVFK
VPYIAPSQWK GCLHAAMVRQ LADWWANPSK NERGKDPSGG ERSKKGEEFV SRRLQLVRLF
GNEQGVEVDT KKFDSYLDKV GGDELAGDYR AKLKRIVPEG HRRGRLMFYP TFFDRIGVEV
INPHDRETGA GKLPVYFETV PEGTCGRFAL LYVPFDRAGK DEGETLREAA ADLCRVAEGI
AFLLTEFGIG AKTADSFGLA AGELPSEGVV AVRLAGKDES SVKTGKFRLL DSQNSEGLVK
TAETLSQSLA RGGGNR
|
|---|
| |