| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0668 |
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| Symbol | |
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| ID | 8490653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | + |
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| Start bp | 693041 |
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| End bp | 694036 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 646358703 |
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| Product | CRISPR-associated protein Cas1 |
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| Protein accession | YP_003238665 |
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| Protein GI | 260892568 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03641] CRISPR-associated endonuclease Cas1, HMARI/TNEAP subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.504883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGGA CTCTTTACCT CTTTCGGAGT GGGCGGTTGC GGCGCAAGGA GAACACCCTG
GCAGTCGAGA CGGAGGAGCA GCGGCGCTAC TTTCCGGTGG AGAATGTGCG GGATATCTTC
GTTTTTGGAG AAGTGGATCT TAACAAAGAA GTTCTGGAGT TTCTGTGTGA CAACGAGATT
TTAGTTCATT TCTTTAGCTA TTACGGGCAT TACGTAGGCT CTTTTTATCC GCGTGAGCAT
TACAATTCCG GGTATATGGT GCTGAAGCAG GCAGAGCATT ACATGGATCC GGCCAAGAGG
CTGAACCTTG CCCGCAGGTT CGTGGAAGGA GCATTGGAGA ACATCCTGCA GGTGTTGCGC
TACTATCATC ACCGCGGGAA AGATCTATCT GAATACGTTG CCGCGATAGA ACGATTTTTA
AAGTCCGCTT TGCCTTCTTG CCAGACTATT GAAGAGCTCA TGGCCATGGA GGGCAACGCC
CGTAGCTACT ACTACGAAAG CTTCAACATT ATTCTGGAAG ACTCTCCTTT TCGGATCGAA
GGGAGGAGCA AAAAGCCTCC CACCGATCCT TTAAACGCTC TCATAAGCTT CGGCAACACC
CTGGTTTACG TCAAGGTGCT TTCAGAAATC TATAAGACCC ATCTGGACCC GCGGATCGGC
TATCTTCACG CCACCAACTT CCGCCGCTTC ACCCTCAATC TCGATGTGGC CGAGGTCTTC
AAGCCTATCC TGGCAGACCG CGTCCTCTTT ACTCTGGTGG GAAGAAGAAT GCTTTCGCCC
GGAGATTTCG ACCGTTGCGG CAGCGCCGTC TTCCTGAGCG AAAGGGGACG CCGCACCCTG
GTAGAGGAGT TTGAACGAAA GCTCCAGAGC ACTTTCCACC ACCGGCGCCT CAAGCGTAAC
GTTAGCTACC AGACCCTTCT GCGTCTGGAG CTTTATAAGC TAGAAAAGCA CCTGATCGGC
GAAGAAGAGT ACACACCCTT TGTCAGCAGG TGGTAG
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| Protein sequence | MKRTLYLFRS GRLRRKENTL AVETEEQRRY FPVENVRDIF VFGEVDLNKE VLEFLCDNEI
LVHFFSYYGH YVGSFYPREH YNSGYMVLKQ AEHYMDPAKR LNLARRFVEG ALENILQVLR
YYHHRGKDLS EYVAAIERFL KSALPSCQTI EELMAMEGNA RSYYYESFNI ILEDSPFRIE
GRSKKPPTDP LNALISFGNT LVYVKVLSEI YKTHLDPRIG YLHATNFRRF TLNLDVAEVF
KPILADRVLF TLVGRRMLSP GDFDRCGSAV FLSERGRRTL VEEFERKLQS TFHHRRLKRN
VSYQTLLRLE LYKLEKHLIG EEEYTPFVSR W
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