| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0655 |
|---|
| Symbol | |
|---|
| ID | 8490640 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 680427 |
|---|
| End bp | 680990 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 646358690 |
|---|
| Product | HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 |
|---|
| Protein accession | YP_003238652 |
|---|
| Protein GI | 260892555 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2179] Predicted hydrolase of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01668] HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.889019 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATAAAAC TTCTCCTTCC CAAGCTCTAC GCTCCCTCGC TCCTTTCTCT TACTCCCCTG
GAATTAAGGC AGCGGGGCAT AAAGGCGTTA CTTCTGGATC TTGACAACAC CCTCGTACCT
CGGGGAGAAG AGAAGGTTGA CTCACCGGTT AAGAACTGGG TGGAGAACTT GAGACGGCAG
GGTTTTAAGC TCTGCGTAGT CTCTAACAAC ACCCACGGCA AGGGGGCCGG GCCGATTCAA
GAGCTGGGGG TTCCGGCCGT CTTTCGGGCA GTCAAGCCCT TTCCCTGGGC TTTCCGCCGG
GCCCTTGAGC TTTTGGGTAC CAGGCCGGAG GAGACAGCCA TAGTGGGGGA CCAACTCTTC
ACCGATATTC TGGGGGGCAA TCTTTTAGGG CTTTACACCA TTTTGGTGCC CTCGCTTAAA
GGTCCCGATT TCATCGCCAC CCGTCTCCTT GTCCGACCCG TGGAGCGCCT GGTGTGGCGC
TGGATCCGCT CTAAGGTTCC TCGCCTTCAG GAACCGGTCC CGAGAAAGAC TGAGCTTCGC
TCCAGTTGCC GGACGGGAGG TTAG
|
|---|
| Protein sequence | MIKLLLPKLY APSLLSLTPL ELRQRGIKAL LLDLDNTLVP RGEEKVDSPV KNWVENLRRQ
GFKLCVVSNN THGKGAGPIQ ELGVPAVFRA VKPFPWAFRR ALELLGTRPE ETAIVGDQLF
TDILGGNLLG LYTILVPSLK GPDFIATRLL VRPVERLVWR WIRSKVPRLQ EPVPRKTELR
SSCRTGG
|
|---|
| |