| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0573 |
|---|
| Symbol | |
|---|
| ID | 8490549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 597557 |
|---|
| End bp | 598870 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 646358600 |
|---|
| Product | tRNA (uracil-5-)-methyltransferase Gid |
|---|
| Protein accession | YP_003238571 |
|---|
| Protein GI | 260892474 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
|---|
| TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000132608 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGTAG TGGTCGTGGG AGCGGGACTG GCCGGATCGG AGGCGGCGTG GCAGATCGCC
CGGCGGGGAA TAAGGGTGAT TCTTTATGAG ATGCGCCCCC ACAAGATGAC CCCGGCGCAC
CACACCGGCT ACTTCGGGGA GCTCGTGTGT TCCAACTCCT TGCGTGCGGA AAGCCTGGAG
AACGCCGTGG GTCTCTTGAA GGAAGAGATG CGGCGGCTGG GCTCCCTTGT CATGCAGGCA
GCGGAGGCCA ACCGGGTTCC GGCCGGAGGG AGCCTGGCCG TGGACCGGGA GGGTTTTGCT
GCCTACATCA CCGAGGCGTT GAGTTCGCAC CCCTTAATCG AAATCCGCCG GGAGGAGGTC
ACCTCCATAC CCGACCACTT CCCTACCATA ATCGCCACCG GCCCCCTGAC TTCTCCTGCC
CTGAGTGCGG CCATAAAGGA GCTCACCGGG GAGGAGTACC TTTACTTCTA CGATGCTGTG
GCGCCCATAG TTACCCTGGA GTCCATCGAC CAGGAGAAGG TTTTCTGGTC CTCCCGCTAC
GGTAAGGGGG AGCCGGCCTA CATCAATTGC CCCATGACCA AGGAGGAGTA CGACCGCTTT
TACGAGGCGC TGGTTACGGC GGAGCGGGTA CCTCTTAAGG AGTTTGAGAA GGAGATCCAC
TTCGAGGGCT GCATGCCCAT AGAGGTAATG GCGGCCCGGG GCAGGGAGAC CTTGCTCTAC
GGCCCCTTGA AGCCGGTGGG GCTCATCGAC CCTCGCACTG GCAAGCAGCC TTATGCGGTG
GTGCAGCTGC GCCAAGATAA CCGAGAGGGC ACCCTTTTCA ACCTGGTGGG TTTCCAGACC
AACCTCAAGT GGAGCGAGCA GAAGAGGGTT TTTCGCTTAA TTCCTGGGCT GGAGAGGGCG
GAGTTCGTGC GCTACGGCGT GATGCACCGT AACACCTTCC TCAACGCCCC CATCCTGCTG
GAGCCCACCC TTCTTTGCAA GAAGAAGCCA GGGCTCTTCT TCGCCGGGCA GATAACGGGA
GTGGAAGGAT ATGTGGAATC GGCAGCGGCA GGCTTGGTGG CGGGAATAAA CGCGGCGCGG
CTGGTGAGGG GAGAGAAACC CCTGGTCTTC CCCCCGGAGA CGGCGCACGG GGCACTGCTT
AACTACATAA CCACCGCCGA TCCCCGTCAT TTCCAGCCCA TGAACGTAAA CTACGGGCTT
TTCCCTCCGC TCGAACGTAA AGTGCGGGAC AAGAGGCGGC GCCGCCTGCT TCTAGCCGAG
AGGGCTCTGG CCGTGCTGGA AGAGTTCATC AAAGCCCACC AATTGGAGGT CTAA
|
|---|
| Protein sequence | MQVVVVGAGL AGSEAAWQIA RRGIRVILYE MRPHKMTPAH HTGYFGELVC SNSLRAESLE
NAVGLLKEEM RRLGSLVMQA AEANRVPAGG SLAVDREGFA AYITEALSSH PLIEIRREEV
TSIPDHFPTI IATGPLTSPA LSAAIKELTG EEYLYFYDAV APIVTLESID QEKVFWSSRY
GKGEPAYINC PMTKEEYDRF YEALVTAERV PLKEFEKEIH FEGCMPIEVM AARGRETLLY
GPLKPVGLID PRTGKQPYAV VQLRQDNREG TLFNLVGFQT NLKWSEQKRV FRLIPGLERA
EFVRYGVMHR NTFLNAPILL EPTLLCKKKP GLFFAGQITG VEGYVESAAA GLVAGINAAR
LVRGEKPLVF PPETAHGALL NYITTADPRH FQPMNVNYGL FPPLERKVRD KRRRRLLLAE
RALAVLEEFI KAHQLEV
|
|---|
| |